Structure of PDB 7zsb Chain c Binding Site BS01

Receptor Information
>7zsb Chain c (length=109) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTA
EILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPN
IQSVLLPKK
Ligand information
>7zsb Chain N (length=219) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agcacgctgtgtatataatagctatggaacgttcgattcacctccgatgt
gtgttgtacatacataaaaatatcatagctcttctgcgctgtgttccgct
caattggtcgtagacagctctagcaccgcttaaacgcacgtacgcgctgt
cccccgcgttttaaccgccaaggggattactccctagtctccaggcacgt
gtcagatatatacatcgat
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7zsb Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Resolution6.6 Å
Binding residue
(original residue number in PDB)
R11 A12 A14 K15 T16 R17 R20 G28 R29 R32 R42 R77
Binding residue
(residue number reindexed from 1)
R1 A2 A4 K5 T6 R7 R10 G18 R19 R22 R32 R67
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7zsb, PDBe:7zsb, PDBj:7zsb
PDBsum7zsb
PubMed36411341
UniProtP06897|H2A1_XENLA Histone H2A type 1

[Back to BioLiP]