Structure of PDB 8jho Chain b Binding Site BS01

Receptor Information
>8jho Chain b (length=82) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAV
TYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Ligand information
>8jho Chain I (length=340) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
attcgatatcgagaatcccggtgccgaggccgctcaattggtcgtagaca
gctctagcaccgcttaaacgcacgtacgcgctgtcccccgcgttttaacc
gccaaggggattactccctagtctccaggcacgtgtcagatatatacatc
ctgtgcatgtattgaaagtactgccagttctagactggagaatcccggtg
ccgaggccgctcaattggtcgtagacagctctagcaccgcttaaacgcac
gtacgcgctgtcccccgcgttttaaccgccaaggggattactccctagtc
tccaggcacgtgtcagatatatacatcctgtgcatgtatt
Receptor-Ligand Complex Structure
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PDB8jho Structure of histone deacetylase complex Rpd3S bound to nucleosome
Resolution7.6 Å
Binding residue
(original residue number in PDB)		T30 P32 R36
Binding residue
(residue number reindexed from 1)		T10 P12 R16
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006334 nucleosome assembly
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8jho, PDBe:8jho, PDBj:8jho
PDBsum8jho
PubMed37798513
UniProtP62799|H4_XENLA Histone H4

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