Structure of PDB 8xjv Chain aj Binding Site BS01

Receptor Information
>8xjv Chain aj (length=123) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLE
YLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGG
VLPNIQSVLLPKKTESSKSAKSK
Ligand information
>8xjv Chain Au (length=2116) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gagcatccggatcccctggagaatcccggtgccgaggccgctcaattggt
cgtagacagctctagcaccgcttaaacgcacgtacgcgctgtcccccgcg
ttttaaccgccaaggggattactccctagtctccaggcacgtgtcacata
tatacatcctgttccagtgggacccgagcatccggatcccctggagaatc
ccggtgccgaggccgctcaattggtcgtagacagctctagcaccgcttaa
acgcacgtacgcgctgtcccccgcgttttaaccgccaaggggattactcc
ctagtctccaggcacgtgtcacatatatacatcctgttccagtgccggac
ccgagcatccggatcccctggagaatcccggtgccgaggccgctcaattg
gtcgtagacagctctagcaccgcttaaacgcacgtacgcgctgtcccccg
cgttttaaccgccaaggggattactccctagtctccaggcacgtgtcaca
tatatacatcctgttccagtgccggacccgagcatccggatcccctggag
aatcccggtgccgaggccgctcaattggtcgtagacagctctagcaccgc
ttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaaggggatta
ctccctagtctccaggcacgtgtcacatatatacatcctgttccagtgcc
ggacccgagcatccggatcccctggagaatcccggtgccgaggccgctca
attggtcgtagacagctctagcaccgcttaaacgcacgtacgcgctgtcc
cccgcgttttaaccgccaaggggattactccctagtctccaggcacgtgt
cacatatatacatcctgttccagtgccggacccgagcatccggatcccct
ggagaatcccggtgccgaggccgctcaattggtcgtagacagctctagca
ccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaagggg
attactccctagtctccaggcacgtgtcacatatatacatcctgttccag
tgccggacccgagcatccggatcccctggagaatcccggtgccgaggccg
ctcaattggtcgtagacagctctagcaccgcttaaacgcacgtacgcgct
gtcccccgcgttttaaccgccaaggggattactccctagtctccaggcac
gtgtcacatatatacatcctgttccagtgccggacccgagcatccggatc
ccctggagaatcccggtgccgaggccgctcaattggtcgtagacagctct
agcaccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaa
ggggattactccctagtctccaggcacgtgtcacatatatacatcctgtt
ccagtgccggacccgagcatccggatcccctggagaatcccggtgccgag
gccgctcaattggtcgtagacagctctagcaccgcttaaacgcacgtacg
cgctgtcccccgcgttttaaccgccaaggggattactccctagtctccag
gcacgtgtcacatatatacatcctgttccagtgccggacccgagcatccg
gatcccctggagaatcccggtgccgaggccgctcaattggtcgtagacag
ctctagcaccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccg
ccaaggggattactccctagtctccaggcacgtgtcacatatatacatcc
tgttccagtgccggacccgagcatccggatcccctggagaatcccggtgc
cgaggccgctcaattggtcgtagacagctctagcaccgcttaaacgcacg
tacgcgctgtcccccgcgttttaaccgccaaggggattactccctagtct
ccaggcacgtgtcacatatatacatcctgttccagtgccggacccgagca
tccggatcccctggagaatcccggtgccgaggccgctcaattggtcgtag
acagctctagcaccgcttaaacgcacgtacgcgctgtcccccgcgtttta
accgccaaggggattactccctagtctccaggcacgtgtcacatatatac
atcctgttccagtgcc
Receptor-Ligand Complex Structure
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PDB8xjv Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction.
Resolution3.6 Å
Binding residue
(original residue number in PDB)
K13 R35 R42 G44 A45 K75 T76 R77
Binding residue
(residue number reindexed from 1)
K7 R29 R36 G38 A39 K69 T70 R71
External links