Structure of PDB 5l8g Chain a Binding Site BS01

Receptor Information
>5l8g Chain a (length=91) Species: 1085 (Rhodospirillum rubrum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
STHEPLEVLKEETVNRHRAIVSVMEELEAVDWYDQRVDASTDPELTAILA
HNRDEEKEAAAMTLEWLRRNDAKWAEHLRTYLFTEGPITAA
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5l8g Chain a Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5l8g Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
Resolution2.974 Å
Binding residue
(original residue number in PDB)		E61 E64
Binding residue
(residue number reindexed from 1)		E55 E58
Annotation score1
Enzymatic activity
Enzyme Commision number 1.16.3.1: ferroxidase.
Gene Ontology
Molecular Function
GO:0004322 ferroxidase activity
Cellular Component
GO:0140737 encapsulin nanocompartment

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5l8g, PDBe:5l8g, PDBj:5l8g
PDBsum5l8g
PubMed27529188
UniProtQ2RVS1|FER_RHORT Encapsulated ferritin-like protein (Gene Name=fer)

[Back to BioLiP]