Structure of PDB 8r57 Chain Z Binding Site BS01

Receptor Information

>8r57 Chain Z (length=71) Species: 4565 (Triticum aestivum)

KVNNAVLFDQATYDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLM
ERGLIRMVSIHSSQQIFTRAT

Ligand information

>8r57 Chain A (length=458)

ggcaccaccaggcguggagccugcggcuuaauuugacucaacacggggaa
acuuaccagguccagacauagcaaggauugacagacugagagcucuuucu
ugauucuaugggugguggugcauggccguucuuaguugguuaauuccguu
aacgaacgagaccucagccugcuaacuagcuaugcggagccaucccuccg
cagcuagcuucuuagagggacuaucgccguuuaggcgacggaaguuugag
gcaauaacaggucugugaugcccuuagauguucugggccgcacgcgcgcu
acacugauguauucaacgaguauauagccuuggccgacaggcccggguaa
ucuugggaaauuucaucgugauggggauagaucauugcaauuguuggucu
ucaacgaggaaugccuaguaagcgcgagucaucagcucgcguugacuacg
ucccugcc

<<<<..<<.<<<<<<..<<<.<<<<<.......<<........>>.....
.....<<<<<......<<<<<........<<.<<<........>>>.>>.
.....>>>>>...<<.<<<..<<<<<<<<<....<<<<<......>>>..
.....>>....<<<<<.<<..<<<<..<<<<.<<<<<<<......>>>>>
>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>
>....>>>.>>>...>.>>>>>>>.......>>>>>....>.>>>>.>>>
.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>...
.>>........>.>>>>...........<<<<<<..........>>>>>>
..........>>>>>>....<<<<<<<<.......>>>>>>>>......>
>...>>>>

Receptor-Ligand Complex Structure

Structure summary

• PDB: 8r57 High-Resolution Structure and Internal Mobility of a Plant 40S Ribosomal Subunit.
• Resolution: 2.55 Å
• Binding residue (original residue number in PDB): K36 V37 N39 N73 G74 S75 R78 H96 S97
• Binding residue (residue number reindexed from 1): K1 V2 N4 N38 G39 S40 R43 H61 S62

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Cellular Component

• GO:0005840 ribosome
• GO:0022627 cytosolic small ribosomal subunit
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:8r57, PDBe:8r57, PDBj:8r57
• PDBsum: 8r57
• PubMed: 38139282
• UniProt: W5EP45