Structure of PDB 8pj1 Chain Y Binding Site BS01 |
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>8pj1 Chain A (length=1754)
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uaccugguugauccugccaguagcauaugcuugucucaaagauuaagcca ugcaugucugaguacgcacggccgguacagugaaacugcgaauggcucau uaaaucaguuaugguuccuuuggucgcucgcuccuacuuggauaacugug guaauucuagagcuaauacaugccgacgggcgcugacccccuucgcgggg gggaugcgugcauuuaucaguggugacucuagauaaccucgggccgaucg cacgccccccguggcggcgacgacccauucgaacgucugcccuaucaacu uucgaugguagucgccgugccuaccauggugaccacgggugacggggaau caggguucgauuccggagagggagccugagaaacggcuaccacauccaag gaaggcagcaggcgcgcaaauuacccacucccgacccggggagguaguga cgaaaaauaacaauacaggacucuuucgaggcccuguaauuggaaugagu ccacuuuaaauccuuuaacgaggauccauuggagggcaagucuggugcca gcagccgcgguaauuccagcuccaauagcguauauuaaaguugcugcagu uaaaaagcucguaguuggaucuugggagcgggcgggcgguccgccgcgag gcgagccaccgcccguccccgccccucucggcggcccgaagcguuuacuu ugaaaaaauuagaguguucaaagcaggcccgagccgccuggauaccgcag cuaggaauaauggaauaggaccgcgguucuauuuuguugguuuucggaac ugaggccaugauuaagagggacggccgggggcauucguauugcgccgcua gaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuug ccaagaauguuuucauuaaucaagaacgaaagucggagguucgaagacga ucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcgg cggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuu uggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugac ggaagggcaccaccaggaguggagccugcggcuuaauuugacucaacacg ggaaaccucacccggcccggacacggacaggauugacagauugauagcuc uuucucgauuccgugggugguggugcauggccguucuuaguugguggagc gauuugucugguuaauuccgauaacgaacgagacucuggcaugcuaacua guuacgcgacccccgagcggucggcgucccccaacuucuuagagggacaa guggcguucagccacccgagauugagcaauaacaggucugugaugcccuu agauguccggggcugcacgcgcgcuacacugacuggcucagcgugugccu acccuacgccggcaggcgcggguaacccguugaaccccauucgugauggg gaucggggauugcaauuauuccccaugaacgaggaauucccaguaagugc gggucauaagcuugcguugauuaagucccugcccuuuguacacaccgccc gucgcuacuaccgauuggaugguuuagugaggcccucggaucggccccgc cgggggcccuggcggagcgcugagaagacggucgaacuugacuaucuaga ggaaguaaaagucguaacaagguuuccguaggugaaccugcggaaggauc auua |
...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<. <<<..<<....<<....<<..........>>...>>.>>......<<... .....<<<.<....<<....<<<<<.............<<.....<<.<< <.....>>>.>>......>>.........<<<<...<<<<........>> >>...>>>><<..<<<<<...<......>..>>>>>......>>...<<< <.<<<<......>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<< ....<<<<<<<.........>>>>>>>>>>......>>>...<<<.<<<< ....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<.... >>.>...>>>>>>.........<<<....<<<<...>>>>..>>>..>.. .>>.>.....<..<...<<..<<....>>..>>.....>...>.....<< ..<...........>..>>.........<<<<<((......<<<<..... <<..))>>.......>>>>.>>>>>..>>>>>>.>>>.........<.<( (.....<.<<...<<<.<<.....<..<<<<<<<<<<<<<.<<<<....> >>>....>>>>>>>>..>>>>>.><<.............>>...<<<<<< .<.......<<...<.......>.<<<<.......>>>>...>>...... >.>>>..>>>........<.<<.<<<.<..................>..> >>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<... <<<......>>>......>>>>>>>>..>>.......<<....>>...>> >>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<. <.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<< <<<.<<<........>>>>>>>>>.>..>>>...<<..))>>...>>... ..>>>.>.>.<<<......<<<<....>>>>....>>>..)))).]<<<< <.<<<<<<<..<<..<<<<<..<<<.<<<<<<......<<........>> ..........<<<<<.<....<<<<<<.......<<.<<<........>> >.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<<.. ..>>>...<<<......>>>...>>.>>>....<<<...<...<<<<..< <<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>..>..... <<<<<.....>>>>>........>>>....>>>.>>>.....>>>>>>>. ....>.>>>>>...>>.>>>>.>>>.....<<.<<<........<..... ..<<<.<<<<....>>>>.>>>....>.........>>>.>>......<. ..<.<<<<<..........>>>>>>....>.....>>>>>.....<<<<< <<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..< <.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<..... ..................>>>>>...>>.>>>>..>>>.>>>>>>>>... >>.>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>..... .... |
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PDB | 8pj1 Structural basis for translational control by the human 48S initiation complex from codon scanning toward subunit joining |
Resolution | 3.4 Å |
Binding residue (original residue number in PDB) | Q11 V12 F13 R15 K16 K17 T18 V22 H24 K26 E43 R45 R69 R71 K73 G74 G75 G76 H77 V78 A79 R125 R126 C127 E128 S129 K130 K131 F132 G136 R138 A139 R140 Y141 Q142 K143 S144 Y145 R146 |
Binding residue (residue number reindexed from 1) | Q6 V7 F8 R10 K11 K12 T13 V17 H19 K21 E38 R40 R64 R66 K68 G69 G70 G71 H72 V73 A74 R120 R121 C122 E123 S124 K125 K126 F127 G131 R133 A134 R135 Y136 Q137 K138 S139 Y140 R141 |
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