Structure of PDB 7qv7 Chain Y Binding Site BS01

Receptor Information
>7qv7 Chain Y (length=571) Species: 2325 (Thermoanaerobacter kivui) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QEKVLTTCPYCGTGCGLYLKVENEKIVGVEPDKLHPVNQGELCIKGYYGY
KYVHDPRRLTSPLIKKNGKFVPVSWDEALNFIANGLKKIKSEYGSDAFAM
FCSARATNEDNYAAQKFARAVIGINNVDHCARLHAPTVAGLAMTLGSGAM
TNSIPEISTYSDVIFIIGSNTAECHPLIAAHVIKAKERGAKLIVADPRMN
AMVHKADIWLRVPSGYNIPLINGMIHIIIKEGLVKTDFVKNHAVGFEEMA
KAVEKYTPEYVEELTGIPKKDLIKAARFYGQAQAAAILYSMGVTQFSHGT
GNVVSLANLAVITGNLGRPGAGICPLRGQNNVQGACDVGALPNVLPGYLD
VTKEQNRERFEKVWGVKLPSNIGLRVTEVPDAILNKRVRALYIFGENPIM
SDPDSDHLRHALEHLDLLIVQDIFLTETARLAHVVLPAACWAEKDGTFTN
TERRVQRVRKAVEAPGEAKPDWWIFSQIAERMGYTGMQYNNVQEIWDEVR
KIVPEKFGGISYARLEKEKGLAWPCPTEDHTGTPGKFATPCICDEGAEKQ
DFNHVIVGSIDEEYPFTLTTG
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain7qv7 Chain Y Residue 801 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7qv7 Membrane-anchored HDCR nanowires drive hydrogen-powered CO 2 fixation.
Resolution3.4 Å
Binding residue
(original residue number in PDB)		C13 C16 C20 L47 C48 G51
Binding residue
(residue number reindexed from 1)		C8 C11 C15 L42 C43 G46
Annotation score1
Enzymatic activity
Enzyme Commision number 1.2.1.2: Transferred entry: 1.17.1.9.
Gene Ontology
Molecular Function
GO:0008863 formate dehydrogenase (NAD+) activity
GO:0016491 oxidoreductase activity
GO:0043546 molybdopterin cofactor binding
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0015942 formate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7qv7, PDBe:7qv7, PDBj:7qv7
PDBsum7qv7
PubMed35859174
UniProtA0A097ATK5

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