Structure of PDB 6rfl Chain Y Binding Site BS01

Receptor Information
>6rfl Chain Y (length=600) Species: 502057 (Vaccinia virus GLV-1h68) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KSHAAYIDYALRRTTNMPVEMMGSDVVRLKDYQHFVARVFLGLDSMHSLL
LFHETGVGKTMTTVYILKHLKDIYTNWAIILLVKKALIEDPWMNTILRYA
PEITKDCIFINYDDQNFRNKFFTNIKTINSKSRICVIIDECHNFISKSLI
KEDGKIRPTRSVYNFLSKTIALKNHKMICLSATPIVNSVQEFTMLVNLLR
PGSLQHQSLFENKRLVDEKELVSKLGGLCSYIVNNEFSIFDDVEGSASFA
KKTVLMRYVNMSKKQEEIYQKAKLAEIKTGISSFRILRRMATTFTFNDFK
NSLRDREFSKSALDTFKKGELLKGDASAADISLFTELKEKSVKFIDVCLG
ILASHGKCLVFEPFQSGIEILLLYFKVFGISNIEFSSRTKDTRIKAVAEF
NQESNTNGECIKTCVFSSSGGEGISFFSINDIFILDMTWNEASLRQIVGR
AIRLNSHVLTPPERRYVNVHFIMARLSNGMPTVDEDLFEIIQSKSKEFVQ
LFRVFKHTSLEWIHANEKDFSPIDNESGWKTLVSRAIDLSSKKNITNKLI
EGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLHDMIKIHDGKLIYIF
Ligand information
>6rfl Chain U (length=63) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ccaugguguaaugguuagcacucuggacuuugaauccagcgauccgaguu
caaaucucggugg
<<<..<<<<........>>>>.<<<<<.......>>>>>....<<<<<..
.....>>>>>>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6rfl Structural Basis of Poxvirus Transcription: Vaccinia RNA Polymerase Complexes.
Resolution2.76 Å
Binding residue
(original residue number in PDB)		R120 F124 I158 R162 S163 N166 F167 K170 K175 H208
Binding residue
(residue number reindexed from 1)		R118 F122 I156 R160 S161 N164 F165 K168 K173 H206
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 23:49:41 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6rfl', asym_id = 'Y', bs = 'BS01', title = 'Structural Basis of Poxvirus Transcription: Vaccinia RNA Polymerase Complexes.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6rfl', asym_id='Y', bs='BS01', title='Structural Basis of Poxvirus Transcription: Vaccinia RNA Polymerase Complexes.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0005524,0006351,0017111,0140658', uniprot = '', pdbid = '6rfl', asym_id = 'Y'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005524,0006351,0017111,0140658', uniprot='', pdbid='6rfl', asym_id='Y')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>