Structure of PDB 1jqy Chain Y Binding Site BS01
Receptor Information
>1jqy Chain Y (length=103) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
APQTITELCSEYRNTQIYTINDKILSYTESMAGKREMVIITFKSGETFQV
EVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAIS
MKN
Ligand information
Ligand ID
A32
InChI
InChI=1S/C20H29N3O10/c24-11-15-16(25)17(26)18(27)20(33-15)32-14-9-12(8-13(10-14)23(29)30)19(28)21-2-1-3-22-4-6-31-7-5-22/h8-10,15-18,20,24-27H,1-7,11H2,(H,21,28)/t15-,16+,17+,18-,20+/m1/s1
InChIKey
CBPMHEKCQNCVNT-QTVCLEQKSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1c(cc(cc1[N+](=O)[O-])O[C@@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)C(=O)NCCCN3CCOCC3
CACTVS 3.341
OC[C@H]1O[C@H](Oc2cc(cc(c2)[N+]([O-])=O)C(=O)NCCCN3CCOCC3)[C@H](O)[C@@H](O)[C@H]1O
OpenEye OEToolkits 1.5.0
c1c(cc(cc1[N+](=O)[O-])OC2C(C(C(C(O2)CO)O)O)O)C(=O)NCCCN3CCOCC3
CACTVS 3.341
OC[CH]1O[CH](Oc2cc(cc(c2)[N+]([O-])=O)C(=O)NCCCN3CCOCC3)[CH](O)[CH](O)[CH]1O
ACDLabs 10.04
[O-][N+](=O)c3cc(OC1OC(C(O)C(O)C1O)CO)cc(C(=O)NCCCN2CCOCC2)c3
Formula
C20 H29 N3 O10
Name
(3-NITRO-5-(3-MORPHOLIN-4-YL-PROPYLAMINOCARBONYL)PHENYL)-GALACTOPYRANOSIDE;
BMSC-0010
ChEMBL
DrugBank
ZINC
ZINC000033821174
PDB chain
1jqy Chain Y Residue 104 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1jqy
Anchor-based design of improved cholera toxin and E. coli heat-labile enterotoxin receptor binding antagonists that display multiple binding modes.
Resolution
2.14 Å
Binding residue
(original residue number in PDB)
E51 Q56 H57 I58 Q61 W88 N90 K91
Binding residue
(residue number reindexed from 1)
E51 Q56 H57 I58 Q61 W88 N90 K91
Annotation score
1
Binding affinity
MOAD
: Ki=12uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0090729
toxin activity
Biological Process
GO:0031640
killing of cells of another organism
GO:0035821
modulation of process of another organism
Cellular Component
GO:0005576
extracellular region
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1jqy
,
PDBe:1jqy
,
PDBj:1jqy
PDBsum
1jqy
PubMed
11880036
UniProt
P32890
|ELBP_ECOLX Heat-labile enterotoxin B chain (Gene Name=eltB)
[
Back to BioLiP
]