Structure of PDB 8apn Chain Xd Binding Site BS01
Receptor Information
>8apn Chain Xd (length=413) Species:
353565
(Polytomella magna) [
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YRNKVTIEYIKLKEPENDDYATRDPTNYAQLLGAISISRHLDRTTYLYET
FKDKFDTIHYVTALTKLPGLVHYRGADLVMRDGVQWSEGVKPFWQKPNAQ
PRKHLLPKAQGLLSKLEEQFPPHLNNLFPRQTANLIWAYGQLKRKQVVAA
CPFLGDFLLSLRRDNFLALDKHATGADYAQIVKGLANLQTAGSPADEDTR
ALIEDFVDQLTQEMLLRRGHARLLDAREAQSILWGLGKLNRRKNTAIIDV
LCDVVLAGVNSLTPTALAGAFSALAKLGHSSRTDVFEAMAKGYHLQTTLM
SPQDVSLTVCACADLGFRDDNLLKICGLKAADMLGEFSNASLAWLMAGFG
RLGYNHEAFFSAVNKSVLAEPVVEVEPGFAWRVLSAYAGSGRKDSESLKV
CGRITEAFLAKLY
Ligand information
>8apn Chain A1 (length=109) [
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ugugaccguuagcgcauaguacaguaauggaagugcauaaaccaaauuaa
aggcuuaaauuaaaaauaaaauggcuggugcaauggcacaaaaaauaaga
aaguuuaaa
<<<<.<<..............<<....>>....<<<<....<<<......
.....................>>>....>>>>..>>>>>>..........
.........
Receptor-Ligand Complex Structure
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PDB
8apn
Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
S98 R101 I120 K128 H134 R136 R143 W148 G151 K153 F155 Q157 R164 H166 R192 W199 A238 D239 Q242 E290 W296 Q365 L369
Binding residue
(residue number reindexed from 1)
S36 R39 I58 K66 H72 R74 R81 W86 G89 K91 F93 Q95 R102 H104 R130 W137 A176 D177 Q180 E228 W234 Q303 L307
External links
PDB
RCSB:8apn
,
PDBe:8apn
,
PDBj:8apn
PDBsum
8apn
PubMed
36253367
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