Structure of PDB 7qiz Chain XA Binding Site BS01

Receptor Information
>7qiz Chain XA (length=50) Species: 4081 (Solanum lycopersicum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
WNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR
Ligand information
>7qiz Chain S2 (length=1584) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccugguugauccugccaguagucauaugcuugucucaaagauuaagcc
augcauguguaaguaugaacaaauagacugugaaacugcgaauggcucau
uaaaucaguuauaguuuguuugaugguuacucggauaaccguaguaauuc
uagagcuaauacgugcaccccgaaagggaugcauuuauuagauagcgaug
auucaugauaacucgacggaucgcacggccgccggcgacgcaucauucaa
auuucugcccuaucaacuuucgaugguaggauaguggccuaccauggugg
ugacgggugacggagaauuaggguucgauuccggagagggagccugagaa
acggcuaccacauccaaggaaggcagcaggcgcgcaaauuacccaauccu
gacacggggagguagugacaauaaauaacaauaccgggagucugguaauu
ggaaugaguacaaucuaaaucccuuaacgaggauccauuggagggcaagu
cuggugccagcagccgcgguaauuccagcuccaauagcguauauuuaagu
uguugcaguuaaaaagcucguaguuggacuuuguguuacuuugaagaaau
uagagugcucaaagcaagccuacgcucuguauacauuagcaugggauaac
auuauaggauuucgguccuaugggaucggaguaaugauuaacagggacag
ucgggggcauucguauuucauagucagaggugaaauucuuggauuuauga
aagacgaacaacugcgaaagcauuugccaaggauguuuucauuaaucaag
aacgaaaguugggggcucgaagacgaucagauaccguccuagucucaacc
auaaacgaugccgaccagggaucggcggauguugcuaggacuccgccggc
accuuaugagaaaucaaaguuuuuggguuccggggggaguauggucgcaa
ggcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccu
gcggcuuaauuugacucaacacggggaaacuuaccagguccagacauagu
agacugagagcucuuucuaugggugguggugcauggccguucuuaguugg
uggagcgauuugucugguuaauuccguuaacgaacgagaccucagccugc
uaacuagcuaugcggagguucccuucgcggccagcuucuuagagggacua
cggccuuuuaggccgcggaaguuugaggcaauaacaggucugugaugccc
uuagauguucugggccgcacgcgcgcuacacugauguauucaacgagcuu
auagccuuggccgacaggcccggguaaucuuugaaauuucaucgugaugg
ggauagaucauugcaauuguuggucuucaacgaggaauuccuaguaagcg
cgagucaucagcucgcguugacuacgucccugcccuuuguacacaccgcc
cgucgcuccuaccgauugaaugauccggugaaauguucggaucgcggucg
cgagaaguccauugaaccuuaucauuuagaggaaggagaagucguaacaa
gguuuccguaggugaaccugcggaaggaucauug
...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<
.<<<..<<....<<....<<.........>>...>>.>>......<<...
.....<<<..<<..<<....<<<<<......<<.....<..<<<.....>
>>..>......>>.....<<<....>>>......<<<<<<..........
.....>>>>>>.........<<<<.<<<<.>>>>>>>>..>>>>>...>>
>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>..
....>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<.......
...>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<
.....>>>..>>>..>....>.>.....<<<<<<<<<<..>>>>>>>.>>
>......<<..<...........>..>>.........<<<<<((......
<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>.....
.....<.<((.....<.<<...<<<.<<......<<<<<<.<<.......
<<...<.......>..<<<....>>>.....>>......>>.>>..>>>>
........<<<<<<<<<<<..>>>>>>>>>>>.....>>....<<<<<<.
<<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>
>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>
>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>.
.........<<<.<<.<<<..<<<<<<<<.<<<.<<>>>>>>>>>>>>>.
.>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....
>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<
<<<........<<........>>..........<<<<<......<<<<<.
<<........>>....>>>>>...<<.<<<..<<.<<<<<<....<<<.<
<<<......>>...<<<......>>>...>>.>>>....<<<<<.<<..<
<<<..<<<<.<<<<<<<<...>>>>>>>>...>>>>..>>>>.>>.....
<<<<<.....>>>>>........>>>>>....>>>.>>>.....>>>>>>
>.......>>>>>......>>>>.>>>.....<<<<.<.......<<...
....<<<.<<<<....>>>>.>>>....>>.......>.>>>>.......
....<<<<<<..........>>>>>>..........>>>>>>....<<<<
<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..
<<.<.<<<<<.<<....<<<<<<<..<<<..<<<<..<...<<<<<..>>
>>>...>..>>>>..>>>..>>>>>>>...>>.>>>>>..>.>>...>..
...<<<<<<<<<....>>>>>>>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7qiz Specific features and methylation sites of a plant ribosome
Resolution2.38 Å
Binding residue
(original residue number in PDB)		W7 N8 H10 Y14 G15 P16 G17 R19 C24 N26 H28 A29 I31 R32 K33 Y34 R40 Q41 R44 K54 Y55 R56
Binding residue
(residue number reindexed from 1)		W1 N2 H4 Y8 G9 P10 G11 R13 C18 N20 H22 A23 I25 R26 K27 Y28 R34 Q35 R38 K48 Y49 R50
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008270 zinc ion binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7qiz, PDBe:7qiz, PDBj:7qiz
PDBsum7qiz
PubMed35643637
UniProtA0A3Q7ITW7

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