Structure of PDB 8ovd Chain X Binding Site BS01
Receptor Information
>8ovd Chain X (length=300) Species:
1772
(Mycolicibacterium smegmatis) [
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WSDALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHR
KKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPN
PEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRKVGPIR
GMTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWV
PEFLFKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNF
EVRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPFESRRGELV
Ligand information
Ligand ID
CU
InChI
InChI=1S/Cu/q+2
InChIKey
JPVYNHNXODAKFH-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Cu+2]
CACTVS 3.341
[Cu++]
Formula
Cu
Name
COPPER (II) ION
ChEMBL
DrugBank
DB14552
ZINC
PDB chain
8ovd Chain X Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
8ovd
Long-range charge transfer mechanism of the III 2 IV 2 mycobacterial supercomplex.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
C273 E275 C277 H281
Binding residue
(residue number reindexed from 1)
C237 E239 C241 H245
Annotation score
1
Gene Ontology
Molecular Function
GO:0004129
cytochrome-c oxidase activity
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
Biological Process
GO:0042773
ATP synthesis coupled electron transport
GO:1902600
proton transmembrane transport
Cellular Component
GO:0016020
membrane
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Molecular Function
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Cellular Component
External links
PDB
RCSB:8ovd
,
PDBe:8ovd
,
PDBj:8ovd
PDBsum
8ovd
PubMed
38902248
UniProt
A0R057
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