Structure of PDB 8etw Chain X Binding Site BS01

Receptor Information
>8etw Chain X (length=442) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMS
GRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETL
MENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLK
SAKGTKTLRLDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATE
FDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDVISMMGQ
LLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDIEIF
TYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIVR
TLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAP
CGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL
Ligand information
>8etw Chain Z (length=28) Species: 559292 (Saccharomyces cerevisiae S288C) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
FVKPRRPYNSEGMTRILRRYEEDLFCTF
Receptor-Ligand Complex Structure
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PDB8etw Reorientation of INO80 on hexasomes reveals basis for mechanistic versatility.
Resolution2.64 Å
Binding residue
(original residue number in PDB)		G158 Y159 G160 I163 S164 E187
Binding residue
(residue number reindexed from 1)		G137 Y138 G139 I142 S143 E166
Enzymatic activity
Enzyme Commision number 3.6.4.12: DNA helicase.
Gene Ontology
Molecular Function
GO:0003678 DNA helicase activity
GO:0004386 helicase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008094 ATP-dependent activity, acting on DNA
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0043138 3'-5' DNA helicase activity
GO:0043139 5'-3' DNA helicase activity
Biological Process
GO:0000492 box C/D snoRNP assembly
GO:0006281 DNA repair
GO:0006325 chromatin organization
GO:0006338 chromatin remodeling
GO:0006355 regulation of DNA-templated transcription
GO:0006357 regulation of transcription by RNA polymerase II
GO:0032508 DNA duplex unwinding
GO:0050821 protein stabilization
Cellular Component
GO:0000785 chromatin
GO:0000812 Swr1 complex
GO:0005634 nucleus
GO:0031011 Ino80 complex
GO:0035267 NuA4 histone acetyltransferase complex
GO:0097255 R2TP complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8etw, PDBe:8etw, PDBj:8etw
PDBsum8etw
PubMed37384669
UniProtQ03940|RUVB1_YEAST RuvB-like protein 1 (Gene Name=RVB1)

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