Structure of PDB 7mxd Chain X Binding Site BS01

Receptor Information
>7mxd Chain X (length=221) Species: 9544 (Macaca mulatta) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QLHLQESGPGLVRPSETLSLTCDVSGGAFNDAYCSWIRRFPGGGLEWIGR
ISGRDGYVESNPALTGRVTMSIDATWKKIVLRLTSMTASDTATYFCAGET
PEDDFGYYQPYFKTWGQGLGVTVSSASTKGPSVFPLAPCSTAALGCLVKD
YFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTY
VCNVNHKPSNTKVDKRVEIKT
Ligand information
Ligand IDMAN
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1
InChIKeyWQZGKKKJIJFFOK-PQMKYFCFSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namealpha-D-mannopyranose;
alpha-D-mannose;
D-mannose;
mannose
ChEMBLCHEMBL365590
DrugBank
ZINCZINC000003860903
PDB chain7mxd Chain m Residue 4 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7mxd Development of Neutralization Breadth against Diverse HIV-1 by Increasing Ab-Ag Interface on V2.
Resolution3.4 Å
Binding residue
(original residue number in PDB)
N30 R54
Binding residue
(residue number reindexed from 1)
N30 R54
Annotation score4
External links