Structure of PDB 4n5i Chain X Binding Site BS01
Receptor Information
>4n5i Chain X (length=311) Species:
568704
(Lacticaseibacillus rhamnosus Lc 705) [
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EAMLAKVQASWAQTAARDKARYADERVPEDVHWETEYRYEQSADPQQTLN
LYYPAKRRNATMPTVIDIHGGGWFYGDRNLNRNYCRYLASQGYAVMGMGY
RLLPDVDLRGQIQDIFASLRWLSHFGPQRGFDLDHVLLTGDSAGGHLASL
VACIQQSAELQELFGVSRVNFNFTLVALVCPVAEPSKLPEAAGDMSDMAA
FYLDKLSGGDQALVDHLNFSQVVKGLDLPPFMLIGGQNDSFYLQSQALLK
VFDANHVTYTTKLWPASAGPHLKHVFNVQHWEWPESIETNLEMLRTFDAL
SKQQDQAEENE
Ligand information
Ligand ID
2HD
InChI
InChI=1S/C19H41O4P/c1-4-7-10-11-12-13-16-24(20)23-18-19(22-15-9-6-3)17-21-14-8-5-2/h19,24H,4-18H2,1-3H3/t19-/m1/s1
InChIKey
NQMHEQXQHWVUHF-LJQANCHMSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
CCCCCCCCP(=O)OCC(COCCCC)OCCCC
CACTVS 3.385
CCCCCCCC[P@H](=O)OC[C@@H](COCCCC)OCCCC
CACTVS 3.385
CCCCCCCC[PH](=O)OC[CH](COCCCC)OCCCC
ACDLabs 12.01
O=P(OCC(OCCCC)COCCCC)CCCCCCCC
OpenEye OEToolkits 1.7.6
CCCCCCCC[P@@H](=O)OC[C@@H](COCCCC)OCCCC
Formula
C19 H41 O4 P
Name
(2R)-2,3-dibutoxypropyl (R)-octylphosphinate
ChEMBL
DrugBank
ZINC
ZINC000098208175
PDB chain
4n5i Chain X Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
4n5i
Crystal Structure of a C8-C4 Sn3 Inhibited Esterase B from Lactobacillus Rhamnosis
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
G75 G76 S146 A147 M202 Y206 H278 Q283
Binding residue
(residue number reindexed from 1)
G71 G72 S142 A143 M198 Y202 H274 Q279
Annotation score
1
External links
PDB
RCSB:4n5i
,
PDBe:4n5i
,
PDBj:4n5i
PDBsum
4n5i
PubMed
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