Structure of PDB 4dpb Chain X Binding Site BS01
Receptor Information
>4dpb Chain X (length=99) Species:
3691
(Populus nigra) [
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IDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGV
DASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN
Ligand information
Ligand ID
CU
InChI
InChI=1S/Cu/q+2
InChIKey
JPVYNHNXODAKFH-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Cu+2]
CACTVS 3.341
[Cu++]
Formula
Cu
Name
COPPER (II) ION
ChEMBL
DrugBank
DB14552
ZINC
PDB chain
4dpb Chain X Residue 100 [
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Receptor-Ligand Complex Structure
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PDB
4dpb
Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
Resolution
1.0 Å
Binding residue
(original residue number in PDB)
H37 C84 H87 M92
Binding residue
(residue number reindexed from 1)
H37 C84 H87 M92
Annotation score
3
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005507
copper ion binding
GO:0009055
electron transfer activity
View graph for
Molecular Function
External links
PDB
RCSB:4dpb
,
PDBe:4dpb
,
PDBj:4dpb
PDBsum
4dpb
PubMed
22883960
UniProt
P00299
|PLAS1_POPNI Plastocyanin A, chloroplastic (Gene Name=PETE)
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