Structure of PDB 2al0 Chain X Binding Site BS01
Receptor Information
>2al0 Chain X (length=180) Species:
13249
(Rhodnius prolixus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MDCSTNISPKQGLDKAKYFSGKWYVTHFLDKDPQVTDQYCSSFTPRESDG
TVKEALYHYNANKKTSFYNIGEGKLESSGLQYTAKYKTVDKKKAVLKEAD
EKNSYTLTVLEADDSSALVHICLREGSKDLGDLYTVLTHQKDAEPSAKVK
SAVTQAGLQLSQFVGTKDLGCQYDDQFTSL
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
2al0 Chain X Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2al0
The crystal structure of nitrophorin 2
Resolution
1.6 Å
Binding residue
(original residue number in PDB)
V24 F27 Q33 Y38 F42 L55 H57 Y85 Y104 I120 L122 L132
Binding residue
(residue number reindexed from 1)
V25 F28 Q34 Y39 F43 L56 H58 Y86 Y105 I121 L123 L133
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0046872
metal ion binding
GO:0051381
histamine binding
GO:0070026
nitric oxide binding
Biological Process
GO:0042311
vasodilation
Cellular Component
GO:0005576
extracellular region
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:2al0
,
PDBe:2al0
,
PDBj:2al0
PDBsum
2al0
PubMed
UniProt
Q26241
|NP2_RHOPR Nitrophorin-2
[
Back to BioLiP
]