Structure of PDB 1rut Chain X Binding Site BS01

Receptor Information
>1rut Chain X (length=157) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKS
GMILCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTC
RNRLVPGDRFHYINGSLFCEHDRPTALIGDVMVVGEPTLMGGEFGDEDER
LITRLEN
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain1rut Chain X Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1rut Tandem LIM domains provide synergistic binding in the LMO4:Ldb1 complex
Resolution1.3 Å
Binding residue
(original residue number in PDB)
C23 C26 H44 C47
Binding residue
(residue number reindexed from 1)
C5 C8 H26 C29
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1rut, PDBe:1rut, PDBj:1rut
PDBsum1rut
PubMed15343268
UniProtP70662|LDB1_MOUSE LIM domain-binding protein 1 (Gene Name=Ldb1)

[Back to BioLiP]