Structure of PDB 9gd3 Chain W Binding Site BS01

Receptor Information
>9gd3 Chain W (length=864) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PTRFSNRQNKTVNYNIDYSDDDLLDFHGIDIVINHRLKDLNNCKENYEFL
IKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTA
EDIEIMDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRL
NYDEATWENATDIVKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKL
SVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAF
ISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRD
TIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDE
AHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRF
TIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL
RVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYL
FDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRV
LIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSND
FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHV
MVYRLVSKDTVEEEVLERARKKMILEYAIIDMDSIGESEVRALYKAILKF
GNLKEILDELIADGTLPVKSFEKYGETYDEMMEAAKDCVHEEEKNRKVLF
NFKGVKSLNAESLLSRVEDLKYLKNLINSNYKDDPLKFSLGNNTPKPVQN
WSSNWTKEEDEKLLIGVFKYGYGSWTQIRDDPFLGITDKIFLKKVPGAIH
LGRRVDYLLSFLRG
Ligand information
>9gd3 Chain I (length=142) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gccgctcaattggtcgtagacagctctagcaccgcttaaacgcacgtacg
cgctgtcccccgcgttttaaccgccaaggggattactccctagtctccag
gcacgtgtcagatatatacatcctgtgcatgtattgaacagc
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9gd3 Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		K497 L649 N650 N653 M720 G743 R750 S770 R772 A773
Binding residue
(residue number reindexed from 1)		K333 L485 N486 N489 M556 G579 R586 S606 R608 A609
External links
PDB RCSB:9gd3, PDBe:9gd3, PDBj:9gd3
PDBsum9gd3
PubMed39270644
UniProtP32657|CHD1_YEAST Chromo domain-containing protein 1 (Gene Name=CHD1)

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