Structure of PDB 9gd1 Chain W Binding Site BS01

Receptor Information
>9gd1 Chain W (length=849) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PTRFSNRQNKTVNYNIDYSDDDLLGIDIVINHRLLNNCKENYEFLIKWTD
ESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEI
MDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEA
TWENATDIVKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPP
FIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLI
FARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREY
EFYTNPKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESS
LYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFEN
QDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTE
YYKNILTKNYSALTAGFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDG
KMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGD
YLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGIN
LMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEV
LERARKKMILEYAIIDMDSIGESEVRALYKAILKFGNLKEILDELIADGT
LPVKSFEKYGETYDEMMEAAKDCVHEEEKNRKVLFNFKGVKSLNAESLLS
RVEDLKYLKNLINSNYKDDPLKFSLGNNTPKPVQNWSSNWTKEEDEKLLI
GVFKYGYGSWTQIRDDPFLGITDKIFLKKVPGAIHLGRRVDYLLSFLRG
Ligand information
>9gd1 Chain I (length=259) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gagaatcccggtgccgaggccgctcaattggtcgtagacagctctagcac
cgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaagggga
ttactccctagtctccagggaattcctcaattggtcgtagacagctctag
caccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaagg
ggattactccctagtctccaggcacgtgtcagatatatacatcctgttct
agagcggcc
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9gd1 Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT.
Resolution4.0 Å
Binding residue
(original residue number in PDB)		E493 K497 S647 L649 N653 M720 V721 G743 R750 S770 R772 A773
Binding residue
(residue number reindexed from 1)		E319 K323 S468 L470 N474 M541 V542 G564 R571 S591 R593 A594
External links
PDB RCSB:9gd1, PDBe:9gd1, PDBj:9gd1
PDBsum9gd1
PubMed39270644
UniProtP32657|CHD1_YEAST Chromo domain-containing protein 1 (Gene Name=CHD1)

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