Structure of PDB 8gym Chain VB Binding Site BS01

Receptor Information
>8gym Chain VB (length=555) Species: 312017 (Tetrahymena thermophila SB210) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SKGFNLANAVNTVKSTLNAPIKHIKRNIEPTGSNYSRMTNTTEEAFDEVS
HEWQALVTSNPFDLNVFNYLENTQTSNFGTVDNPLVVFTSETPFRYVGCT
GQMNEDDYEGHELLFFLLREGSLQRCMGCGQVFKLVRLRNEYSPEMDYYL
SNFHPYEMQEMGESDTTVLMSPYKYASHYEYTQFETPSNMVYSMVNPDEH
DRLLVDPAYRMERTKALEEKYKVYTSSLREVEKQFEERYGRAGQINISKV
TYSTLIDVEKAVLKMDRLFRKVAKFENRAFIDRANHSRREKRMLERAQQR
WDSNYSFFTGSLTEEEQKYRDYYETELEAYPEDEGIEQQLDQQEVLLSGR
YDPKLYDFQEGYTKNPEDDQTSLIEKKAFKFRYRLANETSETFQRRNNRM
VERQIKRFQQPQYKHAFEQLQKNIAISSNSGNALHSEYGYLELLSNESVQ
LYKDYYESDAEEDFKVFENLSSKEKLVMIANFENNLLPKYDRSEVHLIPK
RQWEPAFGVWENFLYDITEYASFIAPRGKEIAADYQIQSAIPLTKEELIE
AGLYK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8gym Chain VB Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8gym Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae.
Resolution2.96 Å
Binding residue
(original residue number in PDB)		S239 H240
Binding residue
(residue number reindexed from 1)		S177 H178
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
Cellular Component
GO:0005740 mitochondrial envelope
GO:0045277 respiratory chain complex IV

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8gym, PDBe:8gym, PDBj:8gym
PDBsum8gym
PubMed37248254
UniProtQ23FF5

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