Structure of PDB 8s1u Chain V Binding Site BS01

Receptor Information
>8s1u Chain V (length=249) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SDIYQHFRKDERAFIDQALEWKRIVQEQYRMKLTDFLDPREQVILSAVTG
QVGLAFSGGYDRAERKRAILFPEYITPEESDFELQAFNVRYADKFVSVDH
RSLLGALMGIGLKRQKFGDIVFSETAVQLIVSADTADFVAAQLTQAGKAA
VSLEKIDLSDLNIVEIRDDTVSSLRLDAVCASMSRQSRQKSQTLVKNGLV
KVNWKVVEDPSYIVAEGDMLSIRGFGRCSLTKIEGKTKKDKWRVTFERQ
Ligand information
>8s1u Chain a (length=69) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggggccuuagcucaggggagagcgccugcucgcaggaggucagcgguucg
aucccgcuaggcuccacca
<<<<<<<..<<<<......>>>>.<<.<....>.>>.....<<<<.....
....>>>>>>>>>>>....
Receptor-Ligand Complex Structure
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PDB8s1u A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis.
Resolution3.4 Å
Binding residue
(original residue number in PDB)		R192 K246
Binding residue
(residue number reindexed from 1)		R185 K239
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0015935 small ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8s1u, PDBe:8s1u, PDBj:8s1u
PDBsum8s1u
PubMed38811035
UniProtP71020|YLMH_BACSU Putative RNA-binding protein YlmH (Gene Name=ylmH)

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