Structure of PDB 5da8 Chain V Binding Site BS01

Receptor Information
>5da8 Chain V (length=500) Species: 194439 (Chlorobaculum tepidum TLS) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TAKDILFDAEARTKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTK
DGVTVAKEIELVDPVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYR
EGLKNVTAGARPIDLKRGIDRAVKEVVAELRNISRSISGKKEIAQVGTIS
ANNDPEIGELIAEAMDKVGKDGVITVEEAKGMETELKVVEGMQFDRGYLS
PYFVTNSETMEAELDEALILDKKIMKELLPILEKRPLLIIAEDILATLVV
NKLRGKVAAVKAPGFGDRRKAMLEDIAILSEEKGYKLENATMAYLGQAAR
ITIDKDNTTIVEGKGKQEEIKARINEIKGQIEDYDTEKLQERLAKLSGGV
AVLKIGASTEVEMKEKKARVEDALHATRAAVQEGIVVGGGVALIRAAKGL
AKAVADNEDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEKVKNAEGD
YGFNARTEQYENLIEAGVVDPTKVTRSALENAASVASILLTTEAAITDVK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain5da8 Chain V Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5da8 Crystal structure of chaperonin GroEL from
Resolution3.0 Å
Binding residue
(original residue number in PDB)		T30 K51
Binding residue
(residue number reindexed from 1)		T29 K50
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) D52 T89 T90
Catalytic site (residue number reindexed from 1) D51 T88 T89
Enzyme Commision number 5.6.1.7: chaperonin ATPase.
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016853 isomerase activity
GO:0051082 unfolded protein binding
GO:0140662 ATP-dependent protein folding chaperone
Biological Process
GO:0006457 protein folding
GO:0009408 response to heat
GO:0042026 protein refolding
GO:0051085 chaperone cofactor-dependent protein refolding
Cellular Component
GO:0005737 cytoplasm
GO:1990220 GroEL-GroES complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5da8, PDBe:5da8, PDBj:5da8
PDBsum5da8
PubMed
UniProtQ8KF02|CH60_CHLTE Chaperonin GroEL (Gene Name=groEL)

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