Structure of PDB 6ppo Chain U Binding Site BS01

Receptor Information
>6ppo Chain U (length=108) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LHLILLPATGNVAENSPPGTSVHKFSVKLSASLSPVIPGFPQIVNSNPLT
EAFRVNWLSGTYFEVVTTGMEQLDFETGPNIFDLQIYVKDEVGVTDLQVL
TVQVTDVN
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6ppo Chain U Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6ppo Cryo-EM structure of rhinovirus C15a bound to its cadherin-related protein 3 receptor.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		E33 E95 D125 N127
Binding residue
(residue number reindexed from 1)		E14 E76 D106 N108
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
Cellular Component
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ppo, PDBe:6ppo, PDBj:6ppo
PDBsum6ppo
PubMed32152109
UniProtQ6ZTQ4|CDHR3_HUMAN Cadherin-related family member 3 (Gene Name=CDHR3)

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