Structure of PDB 5xon Chain U Binding Site BS01

Receptor Information
>5xon Chain U (length=155) Species: 644223 (Komagataella phaffii GS115) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NKTRNGSISAIYTALAMDPSKIFELVKDIEKQCFKAVNDTYRNKLRSLIM
NLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKNLF
DAQGATENNSVTDRFECGKCKQRKVSYFQKQTRSAAAPLTTFCKCENCGN
RWKFS
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5xon Chain U Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5xon Structure of the complete elongation complex of RNA polymerase II with basal factors
Resolution3.83 Å
Binding residue
(original residue number in PDB)
C247 C250
Binding residue
(residue number reindexed from 1)
C117 C120
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Biological Process
GO:0006351 DNA-templated transcription

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Molecular Function

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Biological Process
External links
PDB RCSB:5xon, PDBe:5xon, PDBj:5xon
PDBsum5xon
PubMed28775211
UniProtC4R2R6

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