Structure of PDB 3j45 Chain U Binding Site BS01

Receptor Information
>3j45 Chain U (length=103) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPA
LNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSE
TIK
Ligand information
>3j45 Chain 1 (length=63) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguua
uaaccggcgauuu
.....<<<....(((.>>>.....<<<<<<<..<<<)))....>>>....
..>>>>>>>....
Receptor-Ligand Complex Structure
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PDB3j45 Structure of the SecY channel during initiation of protein translocation.
Resolution9.5 Å
Binding residue
(original residue number in PDB)		R5 R6 K90 K91
Binding residue
(residue number reindexed from 1)		R5 R6 K90 K91
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:3j45, PDBe:3j45, PDBj:3j45
PDBsum3j45
PubMed24153188
UniProtP60624|RL24_ECOLI Large ribosomal subunit protein uL24 (Gene Name=rplX)

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