Structure of PDB 8xi5 Chain T Binding Site BS01

Receptor Information
>8xi5 Chain T (length=41) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RTCRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGN
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8xi5 Chain T Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8xi5 The receptor VLDLR binds Eastern Equine Encephalitis virus through multiple distinct modes.
Resolution3.4 Å
Binding residue
(original residue number in PDB)
W132 D135 D139 D145 E146
Binding residue
(residue number reindexed from 1)
W22 D25 D29 D35 E36
Annotation score4
External links
PDB RCSB:8xi5, PDBe:8xi5, PDBj:8xi5
PDBsum8xi5
PubMed39127734
UniProtP98155|VLDLR_HUMAN Very low-density lipoprotein receptor (Gene Name=VLDLR)

[Back to BioLiP]