Structure of PDB 8r57 Chain T Binding Site BS01

Receptor Information
>8r57 Chain T (length=140) Species: 4565 (Triticum aestivum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
STARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPSDA
DWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVS
RNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA
Ligand information
>8r57 Chain A (length=458) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggcaccaccaggcguggagccugcggcuuaauuugacucaacacggggaa
acuuaccagguccagacauagcaaggauugacagacugagagcucuuucu
ugauucuaugggugguggugcauggccguucuuaguugguuaauuccguu
aacgaacgagaccucagccugcuaacuagcuaugcggagccaucccuccg
cagcuagcuucuuagagggacuaucgccguuuaggcgacggaaguuugag
gcaauaacaggucugugaugcccuuagauguucugggccgcacgcgcgcu
acacugauguauucaacgaguauauagccuuggccgacaggcccggguaa
ucuugggaaauuucaucgugauggggauagaucauugcaauuguuggucu
ucaacgaggaaugccuaguaagcgcgagucaucagcucgcguugacuacg
ucccugcc
<<<<..<<.<<<<<<..<<<.<<<<<.......<<........>>.....
.....<<<<<......<<<<<........<<.<<<........>>>.>>.
.....>>>>>...<<.<<<..<<<<<<<<<....<<<<<......>>>..
.....>>....<<<<<.<<..<<<<..<<<<.<<<<<<<......>>>>>
>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>
>....>>>.>>>...>.>>>>>>>.......>>>>>....>.>>>>.>>>
.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>...
.>>........>.>>>>...........<<<<<<..........>>>>>>
..........>>>>>>....<<<<<<<<.......>>>>>>>>......>
>...>>>>
Receptor-Ligand Complex Structure
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PDB8r57 High-Resolution Structure and Internal Mobility of a Plant 40S Ribosomal Subunit.
Resolution2.55 Å
Binding residue
(original residue number in PDB)
A16 H25 V28 V50 T52 R54 K56 E57 P60 R69 S72 R75 R80 Q81 I83 G84 I85 K90 I91 R95 Q96 R97 G99 S100 R101 P102 P103 H104 F105 K107 S109 G110 A111 R114 Q118 G133 R134 S138 R141 R142 D145
Binding residue
(residue number reindexed from 1)
A3 H12 V15 V37 T39 R41 K43 E44 P47 R56 S59 R62 R67 Q68 I70 G71 I72 K77 I78 R82 Q83 R84 G86 S87 R88 P89 P90 H91 F92 K94 S96 G97 A98 R101 Q105 G120 R121 S125 R128 R129 D132
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:8r57, PDBe:8r57, PDBj:8r57
PDBsum8r57
PubMed38139282
UniProtW5FWF5

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