Structure of PDB 7jqb Chain T Binding Site BS01 |
|
>7jqb Chain A (length=1697)
[Search RNA sequence]
[Download ligand structure]
[Download structure with residue number starting from 1]
[View ligand structure]
|
uaccugguugauccugccaguagcauaugcuugucucaaagauuaagcca ugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucau uaaaucaguuaugguuccuuuggucgcucgacuuggauaacugugguaau ucuagagcuaauacaugccgacgggcgcugacccccuucgcgggggggau gcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgc ccggcggcgacgacccauucgaacgucugcccuaucaacuuucgauggua gucgccgugccuaccauggugaccacgggugacggggaaucaggguucga uuccggagagggagccugagaaacggcuaccacauccaaggaaggcagca ggcgcgcaaauuacccacucccgacccggggagguagugacgaaaaauaa caauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaaa uccuuuaacgaggauccauuggagggcaagucuggugccagcagccgcgg uaauuccagcuccaauagcguauauuaaaguugcugcaguuaaaaagcuc guaguuggaucuugggagcggccguccccugcucggcgccggcccgaagc guuuacuuugaaaaaauuagaguguucaaagcaggccgccuggauaccgc agcuaggaauaauggaauaggaccgcgguucuauuuuguugguuuucgga acugaggccaugauuaagagggacggccgggggcauucguauugcgccgc uagaggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauu ugccaagaauguuuucauuaaucaagaacgaaagucggagguucgaagac gaucagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugc ggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaaaguc uuuggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauug acggaagggcaccaccaggaguggagccugcggcuuaauuugacucaaca cgggaaaccucacccggcccggacacggacaggauugacagauugauagc ucuuucucgauuccgugggugguggugcauggccguucuuaguuggugga gcgauuugucugguuaauuccgauaacgaacgagacucuggcaugcuaac uaguuacgcgaccccggucggcguaacuucuuagagggacaaguggcguu cagccacccgagauugagcaauaacaggucugugaugcccuuagaugucc ggggcugcacgcgcgcuacacugacuggcucagcgugugccuacccuacg ccggcaggcgcggguaacccguugaaccccauucgugauggggaucgggg auugcaauuauuccccaugaacgaggaauucccaguaagugcgggucaua agcuugcguugauuaagucccugcccuuuguacacaccgcccgucgcuac uaccgauuggaugguuuagugaggcccucggaucggccccgccggggugc ccuggcggagcgcugagaagacggucgaacuugacuaucuagaggaagua aaagucguaacaagguuuccguaggugaaccugcggaaggaucauua |
...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<. <<<..<<....<<....<<..........>>...>>.>>......<<... .....<<<.<....<<....<<<<<........<<.....<<.<<<.... .>>>.>>......>>.........<<<<...<<<<<<....>>>>>>... >>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<< <.>>>>>>>>.>>.>>>...>>..>.>>>.<<<....<<<....<<<<<< <.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>.. ..>>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>> >>>.........<<<....<<<<...>>>>..>>>..>...>>.>..... <<<<<<<<<.<<<....>>>..>>>>>>.>>>......<<..<....... ....>..>>.........<<<<<((......<<<<.....<<..))>>.. .....>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<< ...<<<.<<.....<<...<..>...>>....<<<<.......>>>>... ..<<<<<<.<.......<<...<.......>.<<<<.>>>>...>>.... ..>.>>>..>>>........<.<<.<<<<<<<...............>>> >>>>.>>.>....>>....<<<<<<..<...<<<<..<<..<<<<<<<<. ..<<<......>>>......>>>>>>>>..>>.......<<....>>... >>>>..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<< <.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..<.< <<<<<.<<<<<....>>>>>>>>>>>.>..>>>...<<..))>>...>>. ....>>>.>.>.<<<......<<<......>>>....>>>..)))).]<< <<<.<<<<<<<..<<..<<<<<..<<<.<<<<........<<........ >>..........<<<<<.<....<<<<<<.......<<..<<........ >>..>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<<< ....>>>...<<<......>>>...>>.>>>....<<<...<...<<<<. .<<<<<<<<<<<<..>>>>.>>>>>>>>..>>>>..>.....<<<<<... ..>>>>>........>>>....>>>.>>>.....>>>>>>>.....>.>> >>>......>>>>.>>>.....<<.<<<........<.......<<<.<< <<....>>>>.>>>....>.........>>>.>>............<<<< <..........>>>>>...........>>>>>.....<<<<<<<<..... ..>>>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<..<<< <.<<....<<<<<<<<.<<<..<<<<.<<...<<<<<.<<<<<<<<.... >>>>>>>>...>>>>>...>>.>>>>..>>>.>>>>>>>>...>>.>>>> ...>.>>...>.....<<<<<<<<<....>>>>>>>>>......... |
|
Global view | Local view | Structure summary |
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
PDB | 7jqb Nonstructural Protein 1 of SARS-CoV-2 Is a Potent Pathogenicity Factor Redirecting Host Protein Synthesis Machinery toward Viral RNA. |
Resolution | 2.7 Å |
Binding residue (original residue number in PDB) | K25 F28 G35 V36 G37 R38 R39 Y40 W82 F83 N85 R86 Q87 L107 D110 H120 R121 R124 H125 L129 R130 V131 R132 G133 Q134 H135 T136 K137 T138 T139 R141 R144 T145 |
Binding residue (residue number reindexed from 1) | K24 F27 G34 V35 G36 R37 R38 Y39 W81 F82 N84 R85 Q86 L106 D109 H119 R120 R123 H124 L128 R129 V130 R131 G132 Q133 H134 T135 K136 T137 T138 R140 R143 T144 |
|
|
Enzyme Commision number |
? |
|
|
|