Structure of PDB 6wdr Chain T Binding Site BS01 |
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| >6wdr Chain 2 (length=1647)
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aucugguugauccugccaguagucauaugcuugucucaaagauuaagcca
ugcaugucuaaguauaagcaauuuauacagugaaacugcgaauggcucau
uaaaucaguuaucguuuauuugauaguuccuuuacuacaugguauaacug
ugguaauucuagagcuaauacaugcuuaaaaucucgacccuuuggaagag
auguauuuauuagauaaaaaaucaaugucuucggacucuuugaugauuca
uaauaacuuuucgaaucgcauggccuugugcuggcgaugguucauucaaa
uuucugcccuaucaacuuucgaugguaggauaguggccuaccaugguuuc
aacggguaacggggaauaaggguucgauuccggagagggagccugagaaa
cggcuaccacauccaaggaaggcagcaggcgcgcaaauuacccaauccua
auucagggagguagugacaauaaauaacgauacagggcccauucgggucu
uguaauuggaaugaguacaauguaaauaccuuaacgaggaacaauuggag
ggcaagucuggugccagcagccgcgguaauuccagcuccaauagcguaua
uuaaaguuguugcaguuaaaaagcucguaguugaacuuugggcccgguug
gccggucggauuuccaacggggccuuuccuucuggcuaaccuugaguccu
uguggcucuuggcgaaccaggacuuuuacuuugaaaaaauuagaguguuc
aaagcaggcguauugcucgaauauauuagcauggaauaauagaauaggac
guuugguucuauuuuguugguuucuaggaccaucguaaugauuaauaggg
acggucgggggcauaacuacugcgaaagcauuugccaaggacguuuucau
uaaucuaaccauaaacuaugccgacuagggaucgggugguguuuuuuuaa
ugacccacucggcaccuuacgagaaaucaaagucuuuggguucugggggg
aguauggucgcaaggaugaaacuuaaaggaauugacggaagggcaccacc
aggaguggagccugcggcuuaauuugacucaacacggggaaacucaccag
guccagacacaauaaggauugacagauugagagcucuuucuugauuuugu
gggugguggugcauggccguucuuaguugguggagugauuugucugcuua
auugcgauaacgaacgagaccuuaaccuacuaaauaguggugcuagcauu
ugcugguuauccacuucuuagagggacuaucgguuucaagccgauggaag
uuugaggcaauaacaggucugugaugcccuuagacguucugggccgcacg
cgcgcuacacugacggagccagcgagucuaaccuuggccgagaggucuug
guaaucuugugaaacuccgucgugcuggggauagagcauuguaauuauug
cucuucaacgaggaauuccuaguaagcgcaagucaucagcuugcguugau
uacgucccugcccuuuguacacaccgcccgucgcuaguaccgauugaaug
gcuuagugaggccucaggaucugcuuagagaagggggcaacuccaucuca
gagcggagaauuuggacaaacuuggucauuuagaggaacuaaaaguc |
..<<<<<...((((>>>>><<<<.<<<<.....<.<...<.......<<.
<<<..<<....<<....<<..........>>...>>.>>......<<...
.....<<<..<<..<<....<<<..................<.....<<.
<<.......>>.>>......>.........<<<<<..<......>..>>>
>><...<<<<<<......(((.(((.........................
>>>>>>.....>...<<<<..<<<.....>>>.>>>>....>>>...>>>
>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>...
...>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<........
..>>>.>>.<.<<....>>.>...>>>>>..........<<<....<<<.
....>>>..>>>..>....>.>.....<<<<<<<<<.<.......>..>>
>>>>.>>>......<<..<...........>..>>.........<<<<<(
(......<<<<.........)).........>>>>.>>>>>....>>>>>
>>>.........<<.<<................<<....<<<<<<.<<<<
<............>>>>>.>>>>>>.....<<<<<.....<..<<<<...
....>>>>..>.....>>>>>....<<<<<.<<.......<<...<....
...>..<<<.....>>>....>>......>>.>>..>>>.........<<
<..<<<<.<<......))).)))..>>.>>>>.>>>.....>>....<<<
<<<.<<...<<<<........<<....>>...>>>>...>>>>>.>>>..
....................((.((.<<<..<<<<<<<<.<<<.<....>
.>>>>>>>>>>>..>>>...((..>>))...)).....))...>>.<<<.
.......<......>......>>>..)))).....<..<<<<<<......
...<<<..<<..............<<........>>..........<<<<
<......<.<<............<............>..........>>.
.>..................<....<<<.<<<<......>>...<<<...
...>>>...>>.>>>....<<<<..<<..<<<<..<<<<<...<<<....
..>>>.....>>>>>..>>>>.>>....<<<<<<.....>>>>>>.....
...>>>>....>.........................>>>>>........
....>>.....<<<<<<<......<<.....<<..<<<<....>>>>..>
>....>>.......>>>>>>>...........<<<<<<..........>>
>>>>..........>>>.......<<<<...............>>>>...
.........>>>>>>.>.................<<<<.....<<<<<<<
<<<.<<<..<.<<..<...<<<<<<<.<<....<<<....>>>....>>.
>>>>>>>...>..>>.>..>>>.>>>>>>>>>>....>>>>...... |
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| PDB | 6wdr An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7. |
| Resolution | 3.7 Å |
Binding residue
(original residue number in PDB) | P2 G3 R7 Q12 V37 S41 N43 E44 P47 Q48 R57 H64 R68 K69 G72 V73 G74 K75 K78 G82 R86 G87 V88 R89 P90 S97 S99 R102 Q106 K119 R122 E126 Q129 R130 D133 R134 |
Binding residue
(residue number reindexed from 1) | P1 G2 R6 Q11 V36 S40 N42 E43 P46 Q47 R56 H63 R67 K68 G71 V72 G73 K74 K77 G81 R85 G86 V87 R88 P89 S96 S98 R101 Q105 K118 R121 E125 Q128 R129 D132 R133 |
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