Structure of PDB 7z3n Chain Sd Binding Site BS01

Receptor Information

>7z3n Chain Sd (length=52) Species: 759272 (Thermochaetoides thermophila DSM 1495)

ESVWNSRPRTYGKGSRACRVCTHQAGLIRKYGLNICRQCFREKAADIGFV
KY

Ligand information

>7z3n Chain 2 (length=1772)

uaccugguugauucugccaguagucauaugcuugucucaaagauuaagcc
augcaugucuaaguauaagcaauuauacagcgaaacugcgaauggcucau
uaaaucaguuaucguuuauuugauaguaccuuacuacauggauaaccgug
guaauucuagagcuaauacaugcugaaaaucccgacuucggaagggaugu
auuuauuagauuaaaaaccaaugcccuucggggcuuucuggugauucaua
auaacuucucgaaucgcacggccuugcgccggcgaugguucauucaaauu
ucugcccuaucaacuuucgacggcuggguauuggccagccguggugacaa
cggguaacggaggguuagggcucgaccccggagaaggagccugagaaacg
gcuacuacauccaaggaaggcagcaggcgcgcaaauuacccaaucccgac
acggggagguagugacaauaaauacugauacagggcucuuucgggucuug
uaauuggaaugaguacaauuuaaaucccuuaacgaggaacaauuggaggg
caagucuggugccagcagccgcgguaauuccagcuccaauagcguauauu
aaaguuguugagguuaaaaagcucguaguugaaccuugggccuagcccgc
cgguacuggcugggcugggccuuuccuucuggagaaccgcaugccggugu
gucggggaaccaggacuuuuacucugaacaaauuagaucgcuuaaagaag
gccuaugcuugaauacauuagcauggaauaauagaauaggacgugugguu
cuauuuuguugguuucuaggaccgccguaaugauuaauagggacagucgg
gggcgucaguauucaauugucagaggugaaauucuuggauuuauugaaga
cuaacaacugcgaaagcauucgccaaggauguuuucauuaaucaggaacg
aaaguuaggggaucgaagacgaucagauaccgucguagucuuaaccauaa
acuaugccgauuagggaucggacggcguuuauuuuugacccguucggcac
cuuacgauaaaucaaaauguuugggcuccugggggaguauggucgcaagg
cugaaacuuaaagaaauugacggaagggcaccaccagggguggagccugc
ggcuuaauuugacucaacacggggaaacucaccagguccagacacgauga
ggauugacagauugagagcucuuucuugauuucgugggugguggugcaug
gccguucuuaguugguggagugauuugucugcuuaauugcgauaacgaac
gagaccuuaaccugcuaaauagcccguauugccuuggcaguacgccggcu
ucuuagagggacuaucggcucaagccgauggaaguuugaggcaauaacag
gucugugaugcccuuagauguucugggccgcacgcgcgcuacacugacag
agccagcgaguacucccuuggccgagaggcccggguaaucuuguuaaacu
cugucgugcuggggauagagcauugcaauuauugcucuucaacgaggaau
cccuaguaagcgcaagucaucagcuugcguugauuacgucccugcccuuu
guacacaccgcccgucgcuacuaccgauugaacggcucagugaggcuuuc
ggacuggcccagagaggucggcaacgaccacucagggccggaaaguuauc
caaacucggucguuuagaggaaguaaaagucguaacaaggucuccguagg
ugaaccugcggagggaucauuu

...<<<<<.{.[[[[>>>>><<<<.<<<<<<...<.<..........<<<
.<<<..<<....<<....<<.........>>...>>.>>......<<...
.....<<<..<<..<<....<<<...............<<.....<..<<
.......>>..>......>>........<<<<<..........>>>>><.
<.<<<<<<......(((((((.<<<<....>>>>..............>>
>>>>.>...>...<<...<<<<.....>>>>..>>....>>>...>>>>.
.>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>.....
.>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<..........
>>>.>>...<<<..>>>.....>>>>>>.........<<<....<<<...
..>>>..>>>.......>.>....<<<<<<<<<<<<<......>>>>>>>
>.>>>>>.....<<.................>>.........<<<<<((.
.....<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>
>.........<<<[[.....<.<<...<<<.<<....<<<<<<<<<<<<<
<<....>>>>.>>>>>>>>>>>....<<<<<<....<<<.<.<<..>>.>
..>>>....>>>>>>...<<<<<.<<.......<<..<<.......>>.<
<<....>>>....>>......>>.>>..>>>.........<<<.<<<<<<
<<<.....))))))).>>>>>>>>>>>>.....>>....<<<<<<.<<..
.<<<<..<<..<<<<<<.<...<<<......>>>......>.>>>>>>..
>>.......<<....>>...>>>>..>>.>>>.>>>...>>>...>>.>.
...<<<<<<<...<...<<<<.........>>>>...>>>>>>>>.....
.....<<<.<<.<<<..<<<<<<<<.<<<.......>>>>>>>>>>>..>
>>...<<..]]>>...>>.....>>>.>>>.<<<......<<<<....>>
>>....>>>..]]]].}<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<
<<<......<<........>>..........<<<<<..<...<<<<<...
.....<<.<<<........>>>.>>......>>>>>...<<.<<<..<<.
<<<<<.....<<<.<<<<<....>>>...<<<......>>>...>>.>>>
....<<<<<.<<..<<<<..<<<<<<<<<<<<....>>>>>>>>..>>>>
..>>>>.>>...<<<<<<......>>>>>>......>>>>>.....>>.>
>>.....>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<<<<
<<......<<.....<<<.<<<<....>>>>.>>>....>>.......>>
>>>>>......<....<<<<<<..........>>>>>>....>.....>>
>>>>....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>
>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<.<..<
...<<<<<<<.<<<.<<<<<....>>>>>.>>>.>>>>>>>...>..>.>
>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<
....>>>>>>>>>.........

Receptor-Ligand Complex Structure

Structure summary

• PDB: 7z3n Structural inventory of cotranslational protein folding by the eukaryotic RAC complex.
• Resolution: 3.2 Å
• Binding residue (original residue number in PDB): W7 R10 R12 Y14 K16 C24 R32 K33 R40 Q41 C42 Y55
• Binding residue (residue number reindexed from 1): W4 R7 R9 Y11 K13 C21 R29 K30 R37 Q38 C39 Y52

Gene Ontology

--> -->

UnboundLocalError

Python 3.6.8: /usr/bin/python3 Fri Feb 21 02:58:11 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1435     title=pdb2title(pdbid)

   1436     if bs.startswith("BS"):

=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)

   1438     else:

   1439         if lig3:

pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7z3n', asym_id = 'Sd', bs = 'BS01', title = 'Structural inventory of cotranslational protein folding by the eukaryotic RAC complex.'

 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7z3n', asym_id='Sd', bs='BS01', title='Structural inventory of cotranslational protein folding by the eukaryotic RAC complex.')

   1295         display_ec(ec,csaOrig,csaRenu)

   1296     if go:

=> 1297         display_go(go,uniprot,pdbid,asym_id)

   1298     return pubmed,uniprot

   1299 

global display_go = <function display_go>, go = '0003735,0005840,0006412,0008270', uniprot = '', pdbid = '7z3n', asym_id = 'Sd'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0005840,0006412,0008270', uniprot='', pdbid='7z3n', asym_id='Sd')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>