Structure of PDB 4u3u Chain S6 Binding Site BS01 |
|
>4u3u Chain 2 (length=1750)
[Search RNA sequence]
[Download ligand structure]
[Download structure with residue number starting from 1]
[View ligand structure]
|
uaucugguugauccugccaguagucauaugcuugucucaaagauuaagcc augcaugucuaaguauaagcaauuuauacagugaaacugcgaauggcuca uuaaaucaguuaucguuuauuugauaguuccuuuacuacaugguauaacu gugguaauucuagagcuaauacaugcuuaaaaucucgacccuuuggaaga gauguauuuauuagauaaaaaaucaaugucuucggacucuuugaugauuc auaauaacuuuucgaaucgcauggccuugugcuggcgaugguucauucaa auuucugcccuaucaacuuucgaugguaggauaguggccuaccaugguuu caacggguaacggggaauaaggguucgauuccggagagggagccugagaa acggcuaccacauccaaggaaggcagcaggcgcgcaaauuacccaauccu aauucagggagguagugacaauaaauaacgauacagggcccauucggguc uuguaauuggaaugaguacaauguaaauaccuuaacgaggaacaauugga gggcaagucuggugccagcagccgcgguaauuccagcuccaauagcguau auuaaaguuguugcaguuaaaaagcucguaguugaacuuugggcccgguu ggccggucggauuuccaacggggccuuuccuucuggcuaaccuugagucc uuguggcucuuggcgaaccaggacuuuuacuuugaaaaaauuagaguguu caaagcaggcguauugcucgaauauauuagcauggaauaauagaauagga cguuugguucuauuuuguugguuucuaggaccaucguaaugauuaauagg gacggucgggggcaucaguauucaauugucagaggugaaauucuuggauu uauugaagacuaacuacugcgaaagcauuugccaaggacguuuucauuaa ucaagaacgaaaguuaggggaucgaagaugaucagauaccgucguagucu uaaccauaaacuaugccgacuagggaucgggugguguuuuuuuaaugacc cacucggcaccuuacgagaaaucaaagucuuuggguucuggggggaguau ggucgcaaggcugaaacuuaaaggaauugacggaagggcaccaccaggag uggagccugcggcuuaauuugacucaacacggggaaacucaccaggucca gacacaauaaggauugacagauugagagcucuuucuugauuuugugggug guggugcauggccguucuuaguugguggagugauuugucugcuuaauugc gauaacgaacgagaccuuaaccuacuaaauaguggugcuagcauuugcug guuauccacuucuuagagggacuaucgguuucaagccgauggaaguuuga ggcaauaacaggucugugaugcccuuagacguucugggccgcacgcgcgc uacacugacggagccagcgagucuaaccuuggccgagaggucuugguaau cuugugaaacuccgucgugcuggggauagagcauuguaauuauugcucuu caacgaggaauuccuaguaagcgcaagucaucagcuugcguugauuacgu cccugcccuuuguacacaccgcccgucgcuaguaccgauugaauggcuua gugaggccucaggaucugggagaauuuggacaaacuuggucauuuagagg aacuaaaagucguaacaagguuuccguaggugaaccugcggaaggaucau |
...<<<<<...[[[[>>>>>[[[[.((((((................[[[ .[[[..<<....<<....<<..........>>...>>.>>......{{.. ......[[[..{{..{{....[[[..................<.....<< .<<.......>>.>>......>.........<<<<<..<......>..>> >>>[...((((((......<<<<<<<<<<......>>............. .)))))).....]...<<<<..<<<.....>>>.>>>>....]]]...}} }}..]]].<<<....<<<....<<<<<<<<.......>>>>>>>>>>>.. ....>>>...<<<.<<<<....>>>>....>>>.}}.<<.<<<....... ...>>>.>>.<.<<....>>.>...]]]]]].........<<<....<<< .....>>>..>>>...............<<.<<..<.<..........>. >..>>..>>......<<..<...........>..>>.........<<<<< ((......<<<<.....<<..))>>.......>>>>.>>>>>..)))))) ]]]].........[[[{{.......{{...[[[.[[....<<<<<<.<<< <<....<..>....>>>>>.>>>>>>....<<<<<<.............. .................>>>>>>...<<<<<.<<.......<<...<... ....>..<<<.....>>>....>>......>>.>>..>>>.........[ [...((((((((....>>>>>>>>.))))))))..]].....]]....<< <<<<.<<...<<<<..<<..<<<<<<.<...<<<......>>>......> .>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...]] ]...}}......<<<<<<<...<...<<<<.........>>>>...>>>> >>>>..........<<<.<<.<<<..<<<<<<<<.<<<........>>>> >>>>>>>..>>>...<<..}}>>...>>.....>>>.]]].<<<...... <<<<....>>>>....>>>..]]]]..<<<<<.<<<<<<<..<<.<<<<< <..<<<.<<<<<<......<<........>>..........<<<<<.<.. ..<<<<<........<<.<<<........>>>.>>......>>>>>.<.< <.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>> >...>>.>>>....<<<<<.<<..<<<<..<<<<<.<<<<<<....>>>> >>...>>>>>..>>>>.>>....<<<<<<.....>>>>>>.......>>> >>....>>>.>>>.....>>>>>>>>....>.>>>>>...>>.>>>>.>> >.....<<<<<<<......<<.....<<..<<<<....>>>>..>>.... >>.......>>>>>>>...........<<<<<<..........>>>>>>. .........>>>>>>....<<<<<<<<.......>>>>>>>>......>> ...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.< <<..<.<<..<...<<<.>>>...>..>>.>..>>>.>>>>>>>>...>> .>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>....... |
|
Global view | Local view | Structure summary |
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
PDB | 4u3u ? |
Resolution | 2.9 Å |
Binding residue (original residue number in PDB) | K2 N4 S6 P8 Q13 T15 S53 N56 Q59 G60 F61 Q65 G66 V67 L68 C83 Y84 R85 R87 R88 D89 G90 R92 R94 K95 S96 V108 V112 K131 R132 L133 G134 K136 R137 N139 N140 K149 R154 I158 R159 R160 Y169 T170 K171 A172 P173 K174 I175 Q176 R177 V179 Q182 R183 L184 Q185 R186 K187 R188 Q190 R191 K194 V195 A198 Q199 Q201 R202 |
Binding residue (residue number reindexed from 1) | K2 N4 S6 P8 Q13 T15 S53 N56 Q59 G60 F61 Q65 G66 V67 L68 C83 Y84 R85 R87 R88 D89 G90 R92 R94 K95 S96 V108 V112 K131 R132 L133 G134 K136 R137 N139 N140 K149 R154 I158 R159 R160 Y169 T170 K171 A172 P173 K174 I175 Q176 R177 V179 Q182 R183 L184 Q185 R186 K187 R188 Q190 R191 K194 V195 A198 Q199 Q201 R202 |
|
|
Enzyme Commision number |
? |
|
|
|