Structure of PDB 5a2t Chain S Binding Site BS01

Receptor Information
>5a2t Chain S (length=204) Species: 35286 (Bamboo mosaic virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QPWEAIFTKDDLAAIEPKPASANVPNTKQWIGIQAGLIKAGATDANFMKV
LLGLSLEAFDRGSSEATTWDGITEGVEHRAAANAIKEANCPIHKVTYYLA
KPTFAIRQSKNLPPANFAKKNVPSQYKWCAFDAFDGLYDPTCLASELPYD
APSEIDRMAYATFKTIQIKIANDQKGFNLNYNPNVTQARLPNAPLPALPE
PTSD
Ligand information
>5a2t Chain Z (length=125) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuu
uuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuu
uuuuuuuuuuuuuuuuuuuuuuuuu
..................................................
..................................................
.........................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5a2t The Molecular Basis for Flexibility in the Flexible Filamentous Plant Viruses.
Resolution5.6 Å
Binding residue
(original residue number in PDB)		S102 E103 P129 H131 K132 K158 Q163 Q205 I208 Q212 K213
Binding residue
(residue number reindexed from 1)		S64 E65 P91 H93 K94 K120 Q125 Q167 I170 Q174 K175
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5a2t, PDBe:5a2t, PDBj:5a2t
PDBsum5a2t
PubMed26167882
UniProtO37178

[Back to BioLiP]