Structure of PDB 5dfe Chain RZ Binding Site BS01
Receptor Information
>5dfe Chain RZ (length=203) Species:
300852
(Thermus thermophilus HB8) [
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MEYRLKAYYREGEKPSALRRAGKLPGVMYNRHLNRKVYVDLVEFDKVFRQ
ASIHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLSDEPVEMYV
PLRFVGTPAGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSL
HASDLKLPPGVELAVSPEETIAAVVPPEDVEKLAEEAAAEVAEPEVIKKG
KEE
Ligand information
>5dfe Chain QV (length=77) [
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cgcgggguggagcagccugguagcucgucgggcucauaacccgaaggucg
ucgguucaaauccggcccccgcaacca
.<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<
<<<.........>>>>>>>>>>.....
Receptor-Ligand Complex Structure
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PDB
5dfe
Uniformity of Peptide Release Is Maintained by Methylation of Release Factors.
Resolution
3.09998 Å
Binding residue
(original residue number in PDB)
E193 K198 K201 E202 E203
Binding residue
(residue number reindexed from 1)
E193 K198 K201 E202 E203
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
GO:0008097
5S rRNA binding
GO:0019843
rRNA binding
Biological Process
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Cellular Component
External links
PDB
RCSB:5dfe
,
PDBe:5dfe
,
PDBj:5dfe
PDBsum
5dfe
PubMed
27681416
UniProt
Q5SHZ1
|RL25_THET8 Large ribosomal subunit protein bL25 (Gene Name=rplY)
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