Structure of PDB 5mre Chain RR Binding Site BS01

Receptor Information
>5mre Chain RR (length=91) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KIDQSLSKKLPKGTIYDPFDFSMGRIHLDRKYQDIMKSGANPLEFYARPR
ILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM
Ligand information
>5mre Chain aa (length=1501) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaagaauaugauguugguucagauuaagcgcuaaauaaggacaugacaca
ugcgaaucauacguuuauuauugagauaauaaauaugugguguaaacgug
aguaauuuuauuaggaauuaaugaacuauagaauaagcuaaauacuuaau
auuauauaaaaaauuuauauaauaaaaaggauauauauauauauauuuau
cuauagucaagccaauaaugguuuagguaguagguuuauuaagaguuaaa
ccuagccaacgauccauaaucgauaaugaaaguuagaacgaucacguuga
cucugaaauauagucaauaucuauaagauacagcagugaggaauauugga
caaugaucgaaagauugauccaguuacuuauuaggaugauauauauauau
auauaaauugauuaaaaauaaaauccauaaauaauuaaaauaaugauauu
aauuaccauauauuuauauggauauauauauauuuuaauaguccugacua
auauuugugccagcagucgcgguaacacaaagagggcgagcguuaaucau
aaugguuuaaaggauccguagaaugaauuauauauaauuuagaguuaaua
aaauuaauuaaagaauuauaauaguaaagaugaaauaauaauaauaauua
uaagacuaauauaugugaaaauauuaauuaaauauuaacugacauugagg
gauuaaaacuagaguagcgaaacggauucgauacccguguaguucuagua
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aaugaaaguauuccaccugaagaguacguuagcaauaaugaaacucaaaa
caauagacgguuacagacuuaagcaguggagcauguuauuuaauucgaua
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gauuaaguucauaaacgaacaaaacuccauauauauaauuuuaauuauau
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a
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...<<<<<<<<<<..<<<<<<<........................>>>>
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)).]<<.<<...<<<<.....<<<<<<..<<<<<<<<<<......<<...
.....>>..........<<<<<<<.....<<.<<<<<<<<<<..>>>>>>
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.....<<<<<........>>>>>......<....<<<<<<<........>
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...........>>>>..>>..>>....<.<<<.<.<<<<<<<<..<<<<<
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>>>>>>..>>>..>>>>>>>>>>>>..>>>>>>>>..>.>>>..>.....
<<<<<<<<<....>>>>>>>>>............................
.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5mre The structure of the yeast mitochondrial ribosome.
Resolution3.75 Å
Binding residue
(original residue number in PDB)		D56 P57 F58 H66 L67 R108 I109 H111 R112 K120 Q122 R123 R124 S126 K127 R130 R131 Q133 A134
Binding residue
(residue number reindexed from 1)		D17 P18 F19 H27 L28 R61 I62 H64 R65 K73 Q75 R76 R77 S79 K80 R83 R84 Q86 A87
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5mre, PDBe:5mre, PDBj:5mre
PDBsum5mre
PubMed28154081
UniProtP40033|RSM18_YEAST Small ribosomal subunit protein bS18m (Gene Name=RSM18)

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