Structure of PDB 8ua8 Chain R Binding Site BS01

Receptor Information
>8ua8 Chain R (length=37) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CAESDFVCNNGQCVPSRWKCDGDPDCEDGSDESPEQC
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8ua8 Chain R Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8ua8 Cryo-EM structure of SFV VLP-VLDLRAD2 complex at the 3-fold axes
Resolution3.7 Å
Binding residue
(original residue number in PDB)
W89 D92 D94 D96 D102 E103
Binding residue
(residue number reindexed from 1)
W18 D21 D23 D25 D31 E32
Annotation score4
External links
PDB RCSB:8ua8, PDBe:8ua8, PDBj:8ua8
PDBsum8ua8
PubMed
UniProtP98155|VLDLR_HUMAN Very low-density lipoprotein receptor (Gene Name=VLDLR)

[Back to BioLiP]