Structure of PDB 6r84 Chain R Binding Site BS01

Receptor Information
>6r84 Chain R (length=360) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LKKNDLYIFDLSEQLLNSLKLMSCSVCQMSHYQTDYHLMNVKRNLRAAAA
AAAAAAAAAAAAAAAAAAAAAAAAASPYIYFKSKYVLAIYKSLFNKRSLS
NPNEALTFWNSQENPMAISALFMVGGGHFAGAIVSHQRLNETLIEQAVNF
LEHKTFHRYTTSALRRYNESALKTDIQGVLKDWEPYLSKCDNIFIRARNV
SDKKIFTDNTVLNKGDERIKSFPFTTNRPTVLELKKAWCELSYLKILPKE
IISLLKKGRAPLLISFLKKNKLDGNFRLKPESKYSLTPTMLHYASQQGMK
QMALILLSNIKCDPTIKNRLGRTAWDLNRNDDVRHAFQIARYNLGAAAAA
AAAAAAAAAA
Ligand information
>6r84 Chain B (length=76) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gggcguguggcguagucgguagcgcgcucccuuagcaugggagaggucuc
cgguucgauuccggacucguccgcca
<<<<<....<<<<........>>>>.<<<<<.......>>>>>.....<<
<<<.......>>>>>..>>>>>....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6r84 Structure and function of Vms1 and Arb1 in RQC and mitochondrial proteome homeostasis.
Resolution3.6 Å
Binding residue
(original residue number in PDB)		H279 K280 T281 H283 R284 Y285 T378 V379
Binding residue
(residue number reindexed from 1)		H153 K154 T155 H157 R158 Y159 T230 V231
Enzymatic activity
Enzyme Commision number 3.1.-.-
External links
PDB RCSB:6r84, PDBe:6r84, PDBj:6r84
PDBsum6r84
PubMed31189955
UniProtQ04311|VMS1_YEAST tRNA endonuclease VMS1 (Gene Name=VMS1)

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