Structure of PDB 2fyn Chain R Binding Site BS01
Receptor Information
>2fyn Chain R (length=179) Species:
1063
(Cereibacter sphaeroides) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GTRRDFLYYATAGAGAVATGAAVWPLINQMNPSADVQALASIFVDVSSVE
PGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAE
ATDQNRTLDEAGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHGSHYDS
AGRIRKGPAPENLPIPLAKFIDETTIQLG
Ligand information
Ligand ID
FES
InChI
InChI=1S/2Fe.2S
InChIKey
NIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0
S1[Fe]S[Fe]1
Formula
Fe2 S2
Name
FE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
2fyn Chain R Residue 200 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2fyn
Surface-modulated motion switch: Capture and release of iron-sulfur protein in the cytochrome bc1 complex.
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
C129 H131 L132 C134 C149 C151 H152 S154
Binding residue
(residue number reindexed from 1)
C121 H123 L124 C126 C141 C143 H144 S146
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H152
Catalytic site (residue number reindexed from 1)
H144
Enzyme Commision number
7.1.1.8
: quinol--cytochrome-c reductase.
Gene Ontology
Molecular Function
GO:0008121
ubiquinol-cytochrome-c reductase activity
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051537
2 iron, 2 sulfur cluster binding
Biological Process
GO:1902600
proton transmembrane transport
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:2fyn
,
PDBe:2fyn
,
PDBj:2fyn
PDBsum
2fyn
PubMed
16924113
UniProt
Q02762
|UCRI_CERSP Ubiquinol-cytochrome c reductase iron-sulfur subunit (Gene Name=petA)
[
Back to BioLiP
]