Structure of PDB 7qiz Chain QA Binding Site BS01

Receptor Information
>7qiz Chain QA (length=126) Species: 4081 (Solanum lycopersicum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKFSYRGVDLDSLLDMSTDELVKLYPARPRRRFQRGLKRKPMALIKKLRK
AKREAPQGEKPEVVRTHLRNMIIVPEMIGSVIGIYNGKTFNQIEVKPEMI
SHYLAEFSISYKPVKHGRPGIGATHS
Ligand information
>7qiz Chain S2 (length=1584) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccugguugauccugccaguagucauaugcuugucucaaagauuaagcc
augcauguguaaguaugaacaaauagacugugaaacugcgaauggcucau
uaaaucaguuauaguuuguuugaugguuacucggauaaccguaguaauuc
uagagcuaauacgugcaccccgaaagggaugcauuuauuagauagcgaug
auucaugauaacucgacggaucgcacggccgccggcgacgcaucauucaa
auuucugcccuaucaacuuucgaugguaggauaguggccuaccauggugg
ugacgggugacggagaauuaggguucgauuccggagagggagccugagaa
acggcuaccacauccaaggaaggcagcaggcgcgcaaauuacccaauccu
gacacggggagguagugacaauaaauaacaauaccgggagucugguaauu
ggaaugaguacaaucuaaaucccuuaacgaggauccauuggagggcaagu
cuggugccagcagccgcgguaauuccagcuccaauagcguauauuuaagu
uguugcaguuaaaaagcucguaguuggacuuuguguuacuuugaagaaau
uagagugcucaaagcaagccuacgcucuguauacauuagcaugggauaac
auuauaggauuucgguccuaugggaucggaguaaugauuaacagggacag
ucgggggcauucguauuucauagucagaggugaaauucuuggauuuauga
aagacgaacaacugcgaaagcauuugccaaggauguuuucauuaaucaag
aacgaaaguugggggcucgaagacgaucagauaccguccuagucucaacc
auaaacgaugccgaccagggaucggcggauguugcuaggacuccgccggc
accuuaugagaaaucaaaguuuuuggguuccggggggaguauggucgcaa
ggcugaaacuuaaaggaauugacggaagggcaccaccaggaguggagccu
gcggcuuaauuugacucaacacggggaaacuuaccagguccagacauagu
agacugagagcucuuucuaugggugguggugcauggccguucuuaguugg
uggagcgauuugucugguuaauuccguuaacgaacgagaccucagccugc
uaacuagcuaugcggagguucccuucgcggccagcuucuuagagggacua
cggccuuuuaggccgcggaaguuugaggcaauaacaggucugugaugccc
uuagauguucugggccgcacgcgcgcuacacugauguauucaacgagcuu
auagccuuggccgacaggcccggguaaucuuugaaauuucaucgugaugg
ggauagaucauugcaauuguuggucuucaacgaggaauuccuaguaagcg
cgagucaucagcucgcguugacuacgucccugcccuuuguacacaccgcc
cgucgcuccuaccgauugaaugauccggugaaauguucggaucgcggucg
cgagaaguccauugaaccuuaucauuuagaggaaggagaagucguaacaa
gguuuccguaggugaaccugcggaaggaucauug
...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<
.<<<..<<....<<....<<.........>>...>>.>>......<<...
.....<<<..<<..<<....<<<<<......<<.....<..<<<.....>
>>..>......>>.....<<<....>>>......<<<<<<..........
.....>>>>>>.........<<<<.<<<<.>>>>>>>>..>>>>>...>>
>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>>>..
....>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<.......
...>>>.>>.<.<<....>>.>...>>>>>>.........<<<....<<<
.....>>>..>>>..>....>.>.....<<<<<<<<<<..>>>>>>>.>>
>......<<..<...........>..>>.........<<<<<((......
<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>.....
.....<.<((.....<.<<...<<<.<<......<<<<<<.<<.......
<<...<.......>..<<<....>>>.....>>......>>.>>..>>>>
........<<<<<<<<<<<..>>>>>>>>>>>.....>>....<<<<<<.
<<...<<<<..<<..<<<<<<<<...<<<......>>>......>>>>>>
>>..>>.......<<....>>...>>>>...>>>>>.>>>...>>>...>
>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>.
.........<<<.<<.<<<..<<<<<<<<.<<<.<<>>>>>>>>>>>>>.
.>>>...<<..))>>...>>.....>>>.>.>.<<<......<<<<....
>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<.<
<<<........<<........>>..........<<<<<......<<<<<.
<<........>>....>>>>>...<<.<<<..<<.<<<<<<....<<<.<
<<<......>>...<<<......>>>...>>.>>>....<<<<<.<<..<
<<<..<<<<.<<<<<<<<...>>>>>>>>...>>>>..>>>>.>>.....
<<<<<.....>>>>>........>>>>>....>>>.>>>.....>>>>>>
>.......>>>>>......>>>>.>>>.....<<<<.<.......<<...
....<<<.<<<<....>>>>.>>>....>>.......>.>>>>.......
....<<<<<<..........>>>>>>..........>>>>>>....<<<<
<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..
<<.<.<<<<<.<<....<<<<<<<..<<<..<<<<..<...<<<<<..>>
>>>...>..>>>>..>>>..>>>>>>>...>>.>>>>>..>.>>...>..
...<<<<<<<<<....>>>>>>>>>.........
Receptor-Ligand Complex Structure
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PDB7qiz Specific features and methylation sites of a plant ribosome
Resolution2.38 Å
Binding residue
(original residue number in PDB)		R24 P44 A45 R46 R48 R49 R50 R53 K56 K65 R83 T84 H85 R87 N88 Y103 N104 G105 K106 F108 Y121 A123 E124 I127 S128 Y129 K133 H134 G135 R136 G138 G140 A141 S144
Binding residue
(residue number reindexed from 1)		R6 P26 A27 R28 R30 R31 R32 R35 K38 K47 R65 T66 H67 R69 N70 Y85 N86 G87 K88 F90 Y103 A105 E106 I109 S110 Y111 K115 H116 G117 R118 G120 G122 A123 S126
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7qiz, PDBe:7qiz, PDBj:7qiz
PDBsum7qiz
PubMed35643637
UniProtA0A3Q7F5X2

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