Structure of PDB 8ys4 Chain Q Binding Site BS01

Receptor Information
>8ys4 Chain Q (length=41) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RTCRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGN
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8ys4 Chain Q Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ys4 The receptor VLDLR binds Eastern Equine Encephalitis virus through multiple distinct modes.
Resolution4.8 Å
Binding residue
(original residue number in PDB)		W132 D135 D139 D145
Binding residue
(residue number reindexed from 1)		W22 D25 D29 D35
Annotation score4
External links
PDB RCSB:8ys4, PDBe:8ys4, PDBj:8ys4
PDBsum8ys4
PubMed39127734
UniProtP98155|VLDLR_HUMAN Very low-density lipoprotein receptor (Gene Name=VLDLR)

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