Structure of PDB 8ovd Chain Q Binding Site BS01
Receptor Information
>8ovd Chain Q (length=299) Species:
1772
(Mycolicibacterium smegmatis) [
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WSDALALGWPTGITPEAKLNRELWIGSVIASFAVGAIVWGLIFWTSAFHR
KKATDTELPRQFGYNMPLELTLTVIPFLIISVLFYFTVVVQERMMHKDPN
PEVVIDVTAFQWNWKFGYQKIAFADGSFDYDGADPERKEAMTSRVGPIRG
MTPEDRTYLNFDKIETLGTSSEIPVLVLPAGKRIEFVLNSADVIHGFWVP
EFLFKRDVLPEPKANNSDNVFQVSEIQQTGAFVGRCTEMCGTFHAMMNFE
VRVVEPNDFKAYIDQRNAGKTNAEALAAINQPPLAITTEPFESRRGELV
Ligand information
Ligand ID
CU
InChI
InChI=1S/Cu/q+2
InChIKey
JPVYNHNXODAKFH-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Cu+2]
CACTVS 3.341
[Cu++]
Formula
Cu
Name
COPPER (II) ION
ChEMBL
DrugBank
DB14552
ZINC
PDB chain
8ovd Chain Q Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
8ovd
Long-range charge transfer mechanism of the III 2 IV 2 mycobacterial supercomplex.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
H232 C277 M284
Binding residue
(residue number reindexed from 1)
H195 C240 M247
Annotation score
1
Gene Ontology
Molecular Function
GO:0004129
cytochrome-c oxidase activity
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
Biological Process
GO:0042773
ATP synthesis coupled electron transport
GO:1902600
proton transmembrane transport
Cellular Component
GO:0016020
membrane
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Cellular Component
External links
PDB
RCSB:8ovd
,
PDBe:8ovd
,
PDBj:8ovd
PDBsum
8ovd
PubMed
38902248
UniProt
A0R057
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