Structure of PDB 8hrb Chain Q Binding Site BS01
Receptor Information
>8hrb Chain Q (length=835) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYRNVFFVDGTRG
AGKTTFINSVVKSLNSVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSD
KLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALKLDA
QLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLE
SIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAE
RGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKTEPG
MQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQVLQD
FYTKKYHATSLSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDI
FTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQM
LLVGCGSVSIFNQFVTELDREKFEQLISEYVAYMSVGRIESASHWANRCC
AVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMA
SSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTC
IVPPWSEAQDDATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWSRF
YFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVEES
LYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPL
FFLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSDEE
WDYLTKNQQIFQNTITSLNSSTIVGASYDKDTPAR
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
8hrb Chain Q Residue 1001 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8hrb
Molecular basis of RADAR anti-phage supramolecular assemblies.
Resolution
3.78 Å
Binding residue
(original residue number in PDB)
D31 G81 K82 T83 T84 D222 R377
Binding residue
(residue number reindexed from 1)
D19 G52 K53 T54 T55 D187 R342
Annotation score
4
External links
PDB
RCSB:8hrb
,
PDBe:8hrb
,
PDBj:8hrb
PDBsum
8hrb
PubMed
36764292
[
Back to BioLiP
]