Structure of PDB 8css Chain Q Binding Site BS01

Receptor Information
>8css Chain Q (length=86) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AKHLKFIARTVMVQEGNVESAYRTLNRILTMDGLIEDIKHRRYYEKPCRR
RQRESYERCRRIYNMEMARKINFLMRKNRADPWQGC
Ligand information
>8css Chain A (length=846) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugc
aagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaag
ggacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagcc
acacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaagu
uuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccacc
gcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuu
uagaucaccaauaaagcuaaaacucaccugaguuguaaaaaacuccaguu
gacacaaaauagacuacgaaaguggcuuuaacauaucugaacacacaaua
gcuaagacccaaacugggauuagauaccccacuaugcuuagcccuaaacc
ucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccacagc
uuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagccug
uucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagccua
uauaccgccaucuuaacccugaugaaggcuacaaaguacguuaggucaag
guguagcccaugagguggcaagaaaugggcuacauuuucuaccccagaaa
auuuagcaguaaacugagaggcuuaguugaacagggcccugaagcgcguc
acccuccucaaguauacuucaaaggacauuuaacuaaaaccccuacgcau
uuauauagaggagacaaguaaguguacuggaaagugcacuuggacg
..((((..<<<<<<.)))).<<<<<<.<<..<<<<<<<<..<.<<<.<<<
..<......>......<<.......<<<<.<..<<<.....>>>.>..>>
>>..<<<<....<<...<<<....>>>..>>......>>>>.<<...>>.
>>.<<<....>>>.....>>>>>>>........<<<....<<<<....>>
>>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>>
)).......)))..>>>>>..>>.>>>>>>....<<<((.....<<<<..
<<<<.......<<<<<<......<<<.<<<.<<<......>>>..>>>.>
>>.............<<....>>.>>>>>>.....>>>>...>>>>....
<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>........
..<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<....>>
>>.....>>..>>>>>>.....<<<<<<<<...<<<.<<<<<..<<<<<<
<<<<......<<................>>.<<<<<<<.......<<.<<
<..<<<<<<<.<...<<<<<.....>>>.......>>..>.>.>>>...>
>>>>>>>....>>>>>>>..>>>.>>>>>>>.....<<<<.....>>>>.
.>>>>>.....<<<<<<<...>>>>>>>.....>>>...>>>>>>>>...
...<<<<<<..<<<<<......<<<...<<<.....>>>..>>>......
.>>>>>.>>>>>>......<<<<<<<<<....>>>>>>>>>.....
Receptor-Ligand Complex Structure
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PDB8css Principles of mitoribosomal small subunit assembly in eukaryotes.
Resolution2.36 Å
Binding residue
(original residue number in PDB)		A2 K3 H4 K6 D38 R42 K47 P48 C49 R50 R52 Y57 R59 R62 R80 D82
Binding residue
(residue number reindexed from 1)		A1 K2 H3 K5 D37 R41 K46 P47 C48 R49 R51 Y56 R58 R61 R79 D81
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8css, PDBe:8css, PDBj:8css
PDBsum8css
PubMed36482135
UniProtP82921|RT21_HUMAN Small ribosomal subunit protein bS21m (Gene Name=MRPS21)

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