Structure of PDB 8c8z Chain Q Binding Site BS01 |
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>8c8z Chain A (length=2205)
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gguuaagcgacuaagcguacacgguggaugcccuggcagucagaggcgau gaaggacgugcuaaucugcgauaagcgucgguaaggugauaugaaccguu auaaccggcgauuuccgaauggggaaacccaguguguuucgacacacuau cauuaacugaauccauagguuaaugaggcgaaccgggggaacugaaacau cuaaguaccccgaggaaaagaaaucaaccgagauucccccaguagcggcg agcgaacggggagcagcccagagccugaaucaguguguguguuaguggaa gcgucuggaaaggcgcgcgauacagggugacagccccguacacaaaaaug cacaugcugugagcucgaugaguagggcgggacacgugguauccugucug aauauggggggaccauccuccaaggcuaaauacuccugacugaccgauag ugaaccaguaccgugagggaaaggcgaaaagaaccccggcgaggggagug aaaaagaaccugaaaccguguacguacaagcagugggagcacgcuuaggc gugugacugcguaccuuuuguauaaugggucagcgacuuauauucuguag caagguuaaccgaauaggggagccgaagggaaaccgagucuuaacugggc guuaaguugcaggguauagacccgaaacccggugaucaccgggagauagc ugguucuccccgaaagcuauuuagguagcgccucgugaauucaucuccgg ggguagagcacuguuucggcaagcaacccgaugcaaacugcgaauaccgg agaauguuaucacgggagacacacggcgggugcuaacguccgucgugaag agggaaacaacccagaccgccagcuaaggucccaaagucaugguuaagug ggaaacgaugugggaaggcgucggccugcgcggaagauguaacggggcua aaccaugcaccgaagcugcggcagcgacgcuuaugcguuguuggguaggg gagcguucuguaagccugcgaaggugugcugugaggcaugcuggagguau cagaagugcgaaugcugacauaaguaacgauaaagcgggugaaaagcccg cucgccggaagaccaaggguuccuguccaacguuaaucggggcaggguga gucgaccccuaaggcgaggccgaaaggcguagucgaugggaaacagguua auauuccuguacuugguguuacugcgaaggggggacggagaaggcuaugu uggccgggcgacgguugucccgguuuaagcguguaggcugguuuuccagg caaauccggaaaaucaaggcugaggcgugaugacgaggcacuacggugcu gaagcaacaaaugcccugcuuccaggaaaagccucuaagcaucagguaac aucaaaucguaccccaaaccgacacagguggucagguagagaauaccaag gcgcuugagagaacucgggugaaggaacuaggcaaaauggugccgcugau auguaggugaggucccucgcggauggagcugaaaucagucgaagauacca gagacucagugaaauugaacucgcugugaagaugcaguguacccgcggca agacggaaagaccccgugaaccuuuacuauagcuugacacugaacauugu uugauguucuaacguugacccguaauccggguugcggacagugucuggug gguaguuugacuggggcggucuccuccuaaagaguaacggaggagcacga agguuggcuaauccuggucggacaucaggagguuagugcaauggcauaag ccagcuugacugcgagcgugacggcgcgagcaggugcgaaagcaggucau agugauccggugguucugaauggaagggccaucgcucaacggauaaaagg uacuccggggucccuaucugccgugggcgcuggagaacugaggggggcug cuccuaguacgagaggaccggaguggacgcaucacugguguucggguugu caugccaauggcacugcccgguagcuaaaugcggaagagauaagugcuga aagcaucuaagcacgaaacuugccccgagaugaguucucccugacccuuu aaggguccugaaggaacguugaagacgacgacguugauaggccgggugug uaagcgcagcgaugcguugagcuaaccgguacuaaugaaccgugaggcuu aaccu |
<<<<<<<<......<<<<<<<<<<<....{[[..[[<<<<<<<[[<<... ...<<<<<<....(((.>>>.....<<<<<<<..<<<)))....>>>... ...>>>>>>>...>>>....<<<....>>><<<<<<<....>>>>>>>.< <<<<<<<<.........>>>>>>>>>.>>...<<<<<<.....<...... >......>>>>>.>.........<<....>>..<<<<<<.....<<.... .>>....>>>>>>..(((..<<<<......<<<<<<<<<<<<<.<<<... <<<<<......>>>>>((......<<<.....))>>>...>>>...>>>> >>>>>>>>>...>>>>........<<<<<<<<.........>>>>>>>>. .....<<<<<..<<<<>>>>>..)))......]].>>>>>>>.]]..... ..........<<....>>....]].........<<<<.....>>>>.... .........}....>>>>>>>>>>>.......<<<<..<<<<<......> >>>>..>>>>...<.<........>.>.<<<<<<....<<<<<<<<<<<< <..<<<...<<.....>>...>>>...<<....>>..<<<<.....>>>> .....>>>>>>>>>>>>>..<<.<..<<<<<<<....>>>>>>...>..> .>>..<<<<<<....<<<........>>>.<<<<<<<<...<<<<<<<.< <....<<<...<<<.<<<<........>>>>.>>>..>>.>.....>>>> >>.>>>...>>>>>>>.>...<<<<<<<<<<......>>>>>>>>>>... .<<<......>>>...<<<<.<<<...<<<(((.....<<<<<<...... .....<<..<<<<<..<<..>>..>>>>>.>>...........))).... .>>>>>>.>>>...>>>>>>><<<<<<<<<....>>>>>>>>>....>>> >>><.<<<<<...<<<......<<<<<<<<....>>>>>>>>...>>>.. >>>>>..>.....>>>>>><......<<.....<<<<<<.......>>>> >><<<<....<<<<<.<<...<<<<<<...<<.....>>.>>>>>>.... ((<<<.<<<...<<<..<<<<....>>>.>.>>>...>>>..<<<<<... .....>>>>>))<<<<<<<<<<<.....<<<<....<<<<..<<<..<<< <<<<<<<<....(((...>>>>>><<..<<<<...<<<<<<<<<<<<.<< .....>>>>>>>>>>..>>>>...>>>>...>><..<<<<<....>>>>> ...>>>>>>...>>>...>>>>.........>>>>.........>>>>>> >>>>>.>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..> >>>..<<<<....<<.............................<<<<<< .....<<<...<<<<.....>>>>...>>>...>>>>>>........... .>>.>>>>>>.....>.....<<<<<........>>>>>..<<<<<<<<. (((.[[......<<<<.[[<<<<...<<<<.<<<.<<<<<.<<<<<<<.. ..>>>>>>>...<<<.<<<<<<.....>>>>>>>>>....>>>>>.>>>. .>>>>...<...........><<<<<<...........>>>>>>..<<.. .<<<<<<<...<<<<<<.......>>>>>>.....<<...(((>>....> >>>>>>...<<<<..<<<<....>>>>..>>>>.<<<....>>>.>>))) .......<<<<<<<.((..>>>>..))>>>>>>>.............>>> >..]]>>>>...]]..)))>>>>>>>>....<<<<<<<...<<<<..<<< <<<<...............>>>>>>>.<<<<<...<<<<...<<<<<<<< <<<))).>>>>>>..>>>>>...>>>>.>>>>>...<<<....<<<<... ..........>>>>....>>>.>>>>.......>>>>>>>..<<<<<... ..>>>>><....<<..<<<<<.......>>>>>....<<<<<<<<..<<. ...<<<<<....>>>>>...>>...>>>>>.>>>.....>>..>..>>>> >>>>. |
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PDB | 8c8z Cryo-EM captures early ribosome assembly in action. |
Resolution | 3.12 Å |
Binding residue (original residue number in PDB) | A1 R2 V3 K4 R5 G6 V7 I8 R10 R12 H13 K14 K21 G22 Y23 Y24 G25 R27 R29 V30 Y31 R32 F35 Q36 K40 A41 Y44 Y46 R47 D48 R49 R50 Q51 R52 K53 R54 F56 R57 Q58 W60 I61 N65 R69 Y75 S76 N80 K83 D90 R91 K92 |
Binding residue (residue number reindexed from 1) | A1 R2 V3 K4 R5 G6 V7 I8 R10 R12 H13 K14 K21 G22 Y23 Y24 G25 R27 R29 V30 Y31 R32 F35 Q36 K40 A41 Y44 Y46 R47 D48 R49 R50 Q51 R52 K53 R54 F56 R57 Q58 W60 I61 N65 R69 Y75 S76 N80 K83 D90 R91 K92 |
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Enzyme Commision number |
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