Structure of PDB 4ce4 Chain Q Binding Site BS01

Receptor Information
>4ce4 Chain Q (length=154) Species: 9825 (Sus scrofa domesticus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RVPLVPKVRRERKNLSDIRGPSTEATEFTEGRFAILALGGGYLHWGHFEM
MRLTINRSMDPKNMFALWRVPAPFKPITRKGMGQRMGGGKGAIDHYVTPV
KAGRLIVEMGGRCEFKEVQGFLDLVAHKLPFPAKAVSPPPPPPPPPPPPP
PPPP
Ligand information
>4ce4 Chain A (length=1444) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
accaaagcuagcucaacauuuuuuuuaaauaaaauaaaacauucaccuaa
cauuaaaguauaggagauagaaauuuuuauccugacgcuauagagauagu
accguaagggaaagaugaaagaauaaaauaaaaguaaaaaaaagcaaaga
uuaccccuucuaccuuuugcauaaugguuuaaccagaaaaaaucuaacaa
agagaacuuuagcuagauaccccgaaaccagacgagcuacccaugagcag
uuuaaaagaaccaacucaucuauguggcaaaauagugagaagacuuguag
guagaggugaaaagccuaacgagccuggugauagcugguuguccgagaaa
gaauuuuaguucaaccuuaaaaauaccccaaaaauuccaauguauuuuua
agagauagucuaaaaagguacagcuuuuuagaaacggauacaaccuugac
uagagaguaaaucuuaauacacauaaucccaaaaaaacaaacuccuagcc
caauaccggacuaaucuauugaaacauagaagcaauaauguuaauaugag
uaacaagaagccuuucuccucgcacacgcuuacaucaguaacuaauaaua
uacugauaauuaacaaccaauaaaccaaaacaacacuaaaacguuuauua
auuacauuguuaacccaacacaggagugcaccaaggaaagauuaaaagaa
guaaaaggaacucggcaaacacaaaccccgccuguuuaccaaaaacauca
ccucuagcauuacuaguauuagaggcaaugccugcccagugacaccaguu
uaacggccgcgguauucugaccgugcaaagguagcauaaucacuuguucu
ccaaauaaggacuuguaugaauggccacacgaggguuuuacugucucuua
cuuccaaucagugaaauuaaccuucccgugaagaggcgggaauaaaaaaa
uaagacgagaagacccuauggagcuuuaauuaacuauuccaaaaguuaaa
cuuaacauggacuagcaauuucgguuggggugaccucggaguacaaaaaa
cccuccgagugauuuuaaucuagacaaaccagucaaaauaacccaucacu
uauugauccaaaauuuugaucaacggaacaaguuacccuagggauaacag
cgcaauccuguucuagaguuccuaucgacaauaggguuuacgaccucgau
guuggaucaggacacccaaauggugcagccgcuauuaaagguucguuugu
ucaacgauuaaaguccuacgugaucugaguucagaccggagcaauccagg
ucgguuucuaucuauuauaaauuucucccaguacgaaaggacaagagaaa
ugggaccaaccucacaaacgcgucucagagauaauuaaugauuuaaucuu
aaccuaauuaacucauaauaaauccagcccuagaacagggcaca
.........<<<<<.....................<......>.......
..........<<.....>>..............>>.>>>...........
.<<....>>.....................................<<<.
......>>>...<............>..<<<<<........<<<<<.<..
<<....>>...>.>>>>>..<<.<...<<<<.<.....<<<.<<<<<..<
<<<....>>>>...<<<..<<<<........>>>>.>>>....>>>>>.>
>>...<<<.....>>>......>.>>>>......>.>>..<<<<<.....
<<<<....>>>>..<<<<<<<<<<<<.....<<.>>.....>>>>>>>>>
>>.>....<<<<<<<<<......>>>>>>>>>...<<......>>....<
<<<.<<<..................................>>>>>>>..
......>>>>>...<<<<<......>>>>>.........>>>>>.<....
..<<..<<<<..>>>><<<..<<<<........<<<<<....<<....>>
..>>>>>......<<<..<<<<<<<.................>>>>>>>.
......>>>.....<<......>>.>>>>.....>>>..<<<<....<<<
<<<<.<<...............<<<<<<<<..<<<.........>>>...
<<<<<<.............>>>>>>....<<<.<<<..<<<<<....>>>
..>>>>><<<<<<......>>>>>>........<...........<<<<<
.......>>>>>.....>....>>>....>>.>>>>>>......>>.>>>
>>>>.>>>>.>>.....>.....<<<<<........>>>>>.......<<
<.<<<.<<......<<<<.<<<<<<..<<<<..<<<.<<<<.<<<<...>
>>>....>>>>.>>>.>>>>..<<<<.....>>>><<<<<<.........
..>>>>>>.<<<<....<<.<.<<<......>>>.>.>>.....>>>>..
........<<<....>>>............>>>>..>>>>>>.......<
<<....<<<<<<...<<.......>>...>>>>>>.....>>.>......
.<.<<<.<<<<<<..<<.<<<<<<......>>>>>>...>>.<<<<<...
..>>>>>.....>>>>>..>...>>>..>....<<<.<<<....>>>..>
>>....>>..>>>>>>.<<.<<<<<<<.................>>>>>>
><<<<<...............>>>>>.<<<.....<..............
......>....>>>.>>.........<<<<.......>>>>...
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4ce4 Architecture of the Large Subunit of the Mammalian Mitochondrial Ribosome.
Resolution4.9 Å
Binding residue
(original residue number in PDB)		R63 R66 K67 R73 H101 M104 R111 T132 R133 K134 M136 R139 M140 G141 G143 K144 K182 P184
Binding residue
(residue number reindexed from 1)		R9 R12 K13 R19 H47 M50 R57 T78 R79 K80 M82 R85 M86 G87 G89 K90 K128 P130
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4ce4, PDBe:4ce4, PDBj:4ce4
PDBsum4ce4
PubMed24362565
UniProtF1RI89

[Back to BioLiP]