Structure of PDB 9cer Chain P Binding Site BS01

Receptor Information
>9cer Chain P (length=609) Species: 83333,905079 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SNIRIVKRKAKGFFKCEDLVTIKDAVKAAHRIMSDASILVRSYYLRWFQS
SYPLDSDDKELELEHFHISMACSIVQGITRPPVRGVGPEQSVKIDVFNDM
LDEYKRLYERAPNDKENETDLSLSHVLAYSIDNLLTAYKNNIEAHFSKYV
KRFIRCDMLAKGFNKSEANRVAAIYTNAYIYSSLFPSKINKGGFPRVYDL
KANPWVYLPKMVMINQALETDFSSVEHKERRLLNPLPFYSSFVPMHIRID
TSGLSQLLMTKDRLDDFKRSYLAEFGVSLNIKNKGDMLASFEKIFGRKAT
SNREAGLYATEMWSFLTNLKTCRQWKELDGVVRKNDPKGTQWMFDNAVVT
DGVSISFQVIDNSMFGRKAFSREELKTSKLLGCDPGKRDILAITDGIKTI
CYTKGQRDMDTHKTIRLRTSLKRRRGCGLEEYETQVMNRFQKRSCHPEMF
RRYACSRKRMEHMLLECYSHPVFREFKFLVYNKTKSSEHRFMHRVLETFK
RPQTNLSKARCASGVMRMNALKEVQRHGDIIIGWGNWIRRRFESLFKTTT
VPEHYTSQECPSCKGRCLRKATGNPIMRHHLLRCTNDSCCSRWWNRNVAG
AFNILTRLL
Ligand information
>9cer Chain W (length=103) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
auccgguaacgaaacuaccggagacggguuaggaggugacgaccucuaaa
accuagaacuuagagugcaaauacgaguguaaaagcacucuaagagcauu
aaa
.<<<<<<<.......>>>>>>>...<<<<..<<<<........>>>>...
>>>>....<<<<<<<<<<...<<<<..>>>>...>>>>>>>>>>......
...
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9cer Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Resolution4.7 Å
Binding residue
(original residue number in PDB)		R5 I6 R9 K10 K12 N134 R253 L255 N256 P259 H268 R345 R355 K356 N357 S378 K430 G439 T446 H455 I458 R461 K465 R466 R486 H513 V515 E518 F519 K520 F521 Y524 N525 S529 H536 R537 C554 R639 H640 H641 S652 R653 W654 F663
Binding residue
(residue number reindexed from 1)		R4 I5 R8 K9 K11 N133 R231 L233 N234 P237 H246 R323 R333 K334 N335 S356 K387 G396 T403 H412 I415 R418 K422 R423 R443 H470 V472 E475 F476 K477 F478 Y481 N482 S486 H493 R494 C511 R578 H579 H580 S591 R592 W593 F602
External links
PDB RCSB:9cer, PDBe:9cer, PDBj:9cer
PDBsum9cer
PubMed39208796
UniProtL1JXG4;
P0AEX9|MALE_ECOLI Maltose/maltodextrin-binding periplasmic protein (Gene Name=malE)

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