Structure of PDB 8ys2 Chain P Binding Site BS01

Receptor Information
>8ys2 Chain P (length=79) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KCEPSQFQCTNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNN
GQCVPSRWKCDGDPDCEDGSDESPEQCHM
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8ys2 Chain P Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ys2 The receptor VLDLR binds Eastern Equine Encephalitis virus through multiple distinct modes.
Resolution5.2 Å
Binding residue
(original residue number in PDB)		W50 D53 D55 D57 E64
Binding residue
(residue number reindexed from 1)		W19 D22 D24 D26 E33
Annotation score4
External links
PDB RCSB:8ys2, PDBe:8ys2, PDBj:8ys2
PDBsum8ys2
PubMed39127734
UniProtP98155|VLDLR_HUMAN Very low-density lipoprotein receptor (Gene Name=VLDLR)

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