Structure of PDB 8xqw Chain P Binding Site BS01

Receptor Information
>8xqw Chain P (length=617) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DLSRPAESLPARADEAAVQAALADDGGWVGTPDPSKYAAGTTQLSARELQ
EEVAKGNVMTWKDFKQQVSGLQGPEREALLALVAQRVAAERMFFTLEDGS
KVSLWDLQQYVDNNPELAALAASVRRIAVADPEDPAGRPLPGGGASGLDR
SRGLTGAAHMSGQEAEELELDWGQVGRGALWRRRPTRWLLGGLDGVKDWE
LEAYAHEPLANQLLGAKYGGRDPRAVVADPAYAADVLRAGPLLGMTFVLR
AARDLPLQEVASSWRGLLGNYLQRQAPLSLPKAVRPAHLDPTDLNGVAWP
ALLSRPAAAAHAAAEAEAAGAVPDDEMGVAWRVQSGKEAAASVAAAQQLL
QSLPDALCPGPSPAAWPLTGTKLVDEGGRNWRRGGSVWVTLQPEGGVLVQ
AQTGGVVGEQESYLLTHVQGQEALAGAVMSAFMGPQPLDPELAAAARSVL
LVPANGFTAANKERDPNHPLYPSFTGVRPGRAPRDVAAYTLAGGRTPLLA
AGGPGEAKLASELRTVMEAALAAAARAEAEALADAATSPSSTSSRAAPAA
ALAEAEAAEARRARGRAAAAAVMAEGLRRLGPDAVAMLERTAAEAEAPQG
GGAVTSSDIFSLARTLE
Ligand information
Ligand IDA1LXL
InChIInChI=1S/C29H50O/c1-7-21(19(2)3)9-8-20(4)25-12-13-26-24-11-10-22-18-23(30)14-16-28(22,5)27(24)15-17-29(25,26)6/h10,19-21,23-27,30H,7-9,11-18H2,1-6H3/t20-,21+,23+,24+,25-,26+,27+,28+,29-/m0/s1
InChIKeyKZJWDPNRJALLNS-USLLMGQYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CC[C@H](CC[C@H](C)[C@@H]1CC[C@H]2[C@]1(CC[C@@H]3[C@@H]2CC=C4[C@]3(CC[C@H](C4)O)C)C)C(C)C
CACTVS 3.385CC[CH](CC[CH](C)[CH]1CC[CH]2[CH]3CC=C4C[CH](O)CC[C]4(C)[CH]3CC[C]12C)C(C)C
CACTVS 3.385CC[C@H](CC[C@H](C)[C@@H]1CC[C@@H]2[C@H]3CC=C4C[C@H](O)CC[C@@]4(C)[C@@H]3CC[C@@]12C)C(C)C
OpenEye OEToolkits 2.0.7CCC(CCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C)C(C)C
FormulaC29 H50 O
Name(3~{R},8~{R},9~{R},10~{S},13~{S},14~{R},17~{S})-17-[(2~{S},5~{R})-5-ethyl-6-methyl-heptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-ol;
(3~{R},8~{R},9~{R},10~{S},13~{S},14~{R},17~{S})-17-[(2~{S},5~{R})-5-ethyl-6-methyl-heptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-ol
ChEMBL
DrugBank
ZINC
PDB chain8xqw Chain P Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8xqw Conservation and specialization of the Ycf2-FtsHi chloroplast protein import motor in green algae.
Resolution2.9 Å
Binding residue
(original residue number in PDB)
L313 V316 A317 W320 L413 P423 L471
Binding residue
(residue number reindexed from 1)
L257 V260 A261 W264 L357 P367 L415
Annotation score1
External links