Structure of PDB 6y3z Chain P Binding Site BS01

Receptor Information
>6y3z Chain P (length=348) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LIVVSIDPMEYIYKPLTHALKKYLPQVEIVSNLPEFDEMKVFHYGDYEQL
DMDKLMELPNNYFTNSYIYRKALIRKHFLSHTIQTYTAKNPESILKKAYL
ESFTIDLDYAEFLDDALDENWELRQELENESQDKWWIVKPSGIRVFKTIE
DLQAIFDSFDDEDSQLRHFIIQEYLTNPLLLASMDNRKFHIRCYVVCRGD
LQVFVYDRMLALFAAKPFVKDSSVLEFDSIEEIPNERKSNIKEQIHSITN
DVFLAAVNVNRLNFQPLPNAFETYGVDFLIDSNYEVKLLEINAFPDFKQT
GKDLKNLIDELFDDTVKYCVTPIFNENRNKTDDETDPNFVKVIDYTSN
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6y3z Chain P Residue 801 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6y3z Pby1 is a direct partner of the Dcp2 decapping enzyme.
Resolution3.49 Å
Binding residue
(original residue number in PDB)		D446 E451 E459
Binding residue
(residue number reindexed from 1)		D106 E111 E119
Annotation score1
Enzymatic activity
Enzyme Commision number 6.3.2.25: tubulin--tyrosine ligase.
Gene Ontology
Biological Process
GO:0036211 protein modification process

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Molecular Function
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Biological Process
External links
PDB RCSB:6y3z, PDBe:6y3z, PDBj:6y3z
PDBsum6y3z
PubMed32396195
UniProtP38254|TTL_YEAST Probable tubulin--tyrosine ligase PBY1 (Gene Name=PBY1)

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