Structure of PDB 6vpx Chain P Binding Site BS01
Receptor Information
>6vpx Chain P (length=134) Species:
9606
(Homo sapiens) [
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VQLVESGGGVVQPGKSVRLSCVVSDFPFSKYPMYWVRQAPGKGLEWVAAI
SGDAWHVVYSNSVQGRFLVSRDNVKNTLYLEMNSLKIEDTAVYRCARMFQ
ESGPPRLDRWSGRNYYYYSGMDVWGQGTTVTVSS
Ligand information
Ligand ID
GAL
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4+,5-,6-/m1/s1
InChIKey
WQZGKKKJIJFFOK-FPRJBGLDSA-N
SMILES
Software
SMILES
CACTVS 3.370
OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O
OpenEye OEToolkits 1.7.2
C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
ACDLabs 12.01
OC1C(O)C(OC(O)C1O)CO
OpenEye OEToolkits 1.7.2
C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
Formula
C6 H12 O6
Name
beta-D-galactopyranose;
beta-D-galactose;
D-galactose;
galactose
ChEMBL
CHEMBL300520
DrugBank
ZINC
ZINC000002597049
PDB chain
6vpx Chain m Residue 6 [
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Receptor-Ligand Complex Structure
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PDB
6vpx
HIV-1 Envelope and MPER Antibody Structures in Lipid Assemblies.
Resolution
5.0 Å
Binding residue
(original residue number in PDB)
R19 L69 S71 R72
Binding residue
(residue number reindexed from 1)
R18 L68 S70 R71
Annotation score
4
External links
PDB
RCSB:6vpx
,
PDBe:6vpx
,
PDBj:6vpx
PDBsum
6vpx
PubMed
32348769
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